Neisseria gonorrhoeae NJ208430 |
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Putative Neisseria gonorrhoeae NJ208430 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,212,965 bp
GenBank #: CP130891
REBASE acronym: Ngo30
Org_num: 69846
All begin Q6386_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6605 | ABC transporter | |||
| 6610 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo30ORF6610P |
| 6615 | 279 aa hypothetical protein | |||
| 6620 | 186 aa hypothetical protein | |||
| 6625 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo30ORF6610P |
| 6630 | hydroxyacid dehydrogenase | |||
| 6635 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo30ORF6610P |
| 6640 | replication-associated recombination protein A | |||
| 8130 | ATP-dependent Clp protease ATP-binding subunit | |||
| 8135 | R | NgoSH240ORFMP (100% identity) | Ngo30ORF8155P | |
| ??? | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo30ORF8155P |
| 8145 | S | S1.NgoD159ORF6260P (100% identity) | GCANNNNNNNNTGC | S1.Ngo30ORF8155P |
| 8150 | DNA damage-inducible protein D | |||
| 8155 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo30ORF8155P | |
| 8160 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 115 | Tex family protein | |||
| 120 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo30ORF120P |
| 125 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo30ORF120P |
| 130 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo30ORF120P |
| 135 | 93 aa hypothetical protein | |||
| 670 | ribosome recycling factor | |||
| 675 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo30ORF675P |
| 680 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo30ORF675P |
| 685 | FUSC family protein | |||
| 3920 | 62 aa hypothetical protein | |||
| 3925 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo30ORF3925P |
| 3930 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo30ORF3925P |
| 3935 | excinuclease ABC subunit UvrA | |||
| 4120 | type IV pilin protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo30ORF4125P |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | CCGG | Ngo30ORF4125P |
| 4145 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo30ORF4125P | |
| 4150 | replication initiation factor domain-containing | |||
| 5470 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5475 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo30ORF5480P |
| 5480 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo30ORF5480P |
| 5485 | anthranilate synthase component I | |||
| 6735 | 3-isopropylmalate dehydratase small subunit | |||
| 6740 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo30ORF6740P |
| 6745 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo30ORF6740P |
| 6750 | 3-isopropylmalate dehydrogenase | |||
| 8340 | DNA repair protein RadA | |||
| 8345 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo30ORF8345P |
| 8350 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo30ORF8345P |
| 8355 | Z1 domain-containing protein | |||
| 8380 | protein Gly1ORF1 | |||
| 8385 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo30ORF8390P |
| 8390 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo30ORF8390P |
| 8395 | IS1595 family transposase | |||
| 10160 | 184 aa hypothetical protein | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo30ORF10165P |
| 10170 | DpnI domain-containing protein | |||
| 10165 | site-specific DNA-methyltransferase | |||
| 10170 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo30ORF10170P |
| 10175 | leucine--tRNA ligase | |||
| 11230 | cysteine--tRNA ligase | |||
| 11235 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo30ORF11240P |
| 11240 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo30ORF11240P |
| 11245 | GTPase ObgE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6920 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.NgoJH7ORFKP (100% identity) | GCAGA | M.Ngo30ORF6925P |
| 6935 | R | NgoSH240ORFJP (100% identity) | GCAGA | Ngo30ORF6925P |
| 6940 | alpha-hydroxy acid oxidase | |||
| 7395 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 7400 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo30ORF7405P |
| 7405 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.Ngo30ORF7405P |
| 7410 | peptidylprolyl isomerase | |||