Neisseria gonorrhoeae NJ209649 |
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Putative Neisseria gonorrhoeae NJ209649 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,216,289 bp
GenBank #: CP130889
REBASE acronym: Ngo9
Org_num: 69848
All begin Q6378_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1390 | ABC transporter | |||
| 1395 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo9ORF1395P |
| 1400 | 279 aa hypothetical protein | |||
| 1405 | 186 aa hypothetical protein | |||
| 1410 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo9ORF1395P |
| 1415 | hydroxyacid dehydrogenase | |||
| 1420 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo9ORF1395P |
| 1425 | replication-associated recombination protein A | |||
| 2925 | ATP-dependent Clp protease ATP-binding subunit | |||
| 2930 | R | NgoSH240ORFMP (100% identity) | Ngo9ORF2950P | |
| ??? | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo9ORF2950P |
| 2940 | S | S1.Ngo205ORF7120P (100% identity) | GCANNNNNNNNTGC | S1.Ngo9ORF2950P |
| 2945 | DNA damage-inducible protein D | |||
| 2950 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo9ORF2950P | |
| 2955 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1520 | 3-isopropylmalate dehydratase small subunit | |||
| 1525 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo9ORF1525P |
| 1530 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo9ORF1525P |
| 1535 | 3-isopropylmalate dehydrogenase | |||
| 3135 | DNA repair protein RadA | |||
| 3140 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo9ORF3140P |
| 3145 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo9ORF3140P |
| 3150 | Z1 domain-containing protein | |||
| 3175 | protein Gly1ORF1 | |||
| 3180 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo9ORF3185P |
| 3185 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo9ORF3185P |
| 3190 | IS1595 family transposase | |||
| 3465 | phenylalanine--tRNA ligase subunit beta | |||
| 3470 | R | NgoWSORF391P (100% identity) | CCGG | Ngo9ORF3475P |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo9ORF3475P |
| 3485 | V | V.NgoWSORF391P (100% identity) | V.Ngo9ORF3475P | |
| 3490 | phenylalanine--tRNA ligase subunit alpha | |||
| 4970 | 184 aa hypothetical protein | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo9ORF4975P |
| 4980 | DpnI domain-containing protein | |||
| 4975 | site-specific DNA-methyltransferase | |||
| 4980 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo9ORF4980P |
| 4985 | leucine--tRNA ligase | |||
| 6035 | cysteine--tRNA ligase | |||
| 6040 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo9ORF6045P |
| 6045 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo9ORF6045P |
| 6050 | GTPase ObgE | |||
| 6595 | Tex family protein | |||
| 6600 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo9ORF6600P |
| 6605 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo9ORF6600P |
| 6610 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo9ORF6600P |
| 6615 | 93 aa hypothetical protein | |||
| 7150 | ribosome recycling factor | |||
| 7155 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo9ORF7155P |
| 7160 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo9ORF7155P |
| 7165 | FUSC family protein | |||
| 10405 | 62 aa hypothetical protein | |||
| 10410 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo9ORF10410P |
| 10415 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo9ORF10410P |
| 10420 | excinuclease ABC subunit UvrA | |||
| 10610 | 48 aa hypothetical protein | |||
| 10615 | M | M.NgoD159ORF475AP (100% identity) | M.Ngo9ORF10615AP | |
| 10620 | M | M.NgoD159ORF475BP (100% identity) | M.Ngo9ORF10615BP | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | CCGG | Ngo9ORF10615P |
| 10635 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo9ORF10615P | |
| 10640 | replication initiation factor domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1705 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo9035ORF5560P (99% identity) | M.Ngo9ORF1715P | |
| 1720 | R | Ngo5ORF440P (100% identity) | Ngo9ORF1715P | |
| 1725 | alpha-hydroxy acid oxidase | |||
| 2180 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 2185 | R | Ngos1291ORF8455P (100% identity) | Ngo9ORF2190P | |
| 2190 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo9ORF2190P | |
| 2195 | peptidylprolyl isomerase | |||