Schaalia species HMT-172 F0311 |
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Putative Schaalia species HMT-172 F0311 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
Complete sequence: 2,533,704 bp
GenBank #: CP130058
REBASE acronym: Ssp0311
Org_num: 70843
All begin QU663_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10390 | helix-turn-helix transcriptional regulator | |||
| 10395 | M | M.StuCT001ORF5270P (54% identity) | M.Ssp0311ORF10395P | |
| 10400 | S | S.CglB414ORF3165P (38% identity) | S.Ssp0311ORF10395P | |
| 10405 | R | Cat44849ORF1260P (77% identity) | Ssp0311ORF10395P | |
| 10410 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6400 | 116 aa hypothetical protein | |||
| 6405 | RM | Dva640ORF745P (35% identity) | Ssp0311ORF6405P | |
| 6410 | isoleucine--tRNA ligase | |||
| 7835 | type I restriction endonuclease subunit R | |||
| 7840 | RM | Lgr10812ORF1795P (51% identity) | Ssp0311ORF7840P | |
| 7845 | type I restriction-modification system subunit M | |||
| 9930 | 101 aa hypothetical protein | |||
| 9935 | M | M.KspKD4ORF12410P (71% identity) | M.Ssp0311ORF9935P | |
| 9940 | ISL3 family transposase | |||
| 9945 | R | AspLS16ORF15690P (49% identity) | Ssp0311ORF9935P | |
| 9950 | adenylosuccinate lyase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7845 | type I restriction-modification system subunit M | |||
| 7850 | R | Aod17982McrCP (85% identity) | Ssp0311McrCP | |
| 7855 | R | Sod18080McrBP (48% identity) | Ssp0311McrBP | |
| 7860 | type II toxin-antitoxin system VapC family | |||