Salmonella enterica subsp. enterica serovar Typhimurium HS_180Salm |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium HS_180Salm RM systems
Ref: Shutinoski,B. et al. unpublished
REBASE ref # 37338
| Sequence length: | GenBank #: | |
| Chromosome: | 4,894,501 bp | CP129209 |
| plasmid unnamed1: | 94,026 bp | CP129210 |
REBASE acronym: Sen180S
Org_num: 70841
All begin N5C85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3839 | restriction endonuclease | |||
| 3840 | R | SenA242IIP (100% identity) | GAGNNNNNNRTAYG | Sen180SORF3841P |
| 3841 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen180SORF3841P |
| 3842 | S | S.Sen237ORF21900P (100% identity) | GAGNNNNNNRTAYG | S.Sen180SORF3841P |
| 3843 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 362 | cell division protein DamX | |||
| 363 | M | M.StyTDamP (100% identity) | GATC | M.Sen180SDamP |
| 364 | ribulose-phosphate 3-epimerase | |||
| 1718 | PerC family transcriptional regulator | |||
| 1719 | M | M.StyUK1V (100% identity) | GATC | M.Sen180SORF1719P |
| 1720 | RusA family crossover junction | |||
| 1768 | phosphohydrolase | |||
| 1769 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen180SDcmP |
| 1770 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen180SDcmP |
| 1771 | drug/metabolite exporter YedA | |||
| 3871 | BREX system P-loop protein BrxC | |||
| 3872 | RM | StyUK1IV (100% identity) | GATCAG | Sen180SORF3872P |
| 3873 | AAA family ATPase | |||
| 4409 | DNA-binding transcriptional regulator Fis | |||
| 4410 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen180SORF4410P |
| 4411 | DUF2556 family protein | |||
| plasmid unnamed1 | ||||
| 4834 | 73 aa hypothetical protein | |||
| 4835 | M | M.SenA242ORF4793P (100% identity) | M.Sen180SORF4835P | |
| 4836 | 93 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3403 | small effector SsaA | |||
| 3404 | R | StyUK1IP (99% identity) | CAGAG | Sen180SORF3405P |
| 3405 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen180SORF3405P |
| 3406 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3838 | BrnT family toxin | |||
| 3839 | R | StyUK1MrrP (100% identity) | Sen180SMrr2P | |
| 3840 | type I restriction-modification system | |||
| 3876 | protease Lon-related BREX system protein BrxL | |||
| 3877 | R | StyLTMrrP (100% identity) | Sen180SMrrP | |
| 3878 | AAA domain-containing protein | |||