Salmonella enterica subsp. enterica serovar Typhimurium HS_187Salm |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium HS_187Salm RM systems
Ref: Shutinoski,B. et al. unpublished
REBASE ref # 37338
| Sequence length: | GenBank #: | |
| Chromosome: | 4,894,979 bp | CP129206 |
| plasmid unnamed1: | 94,032 bp | CP129207 |
REBASE acronym: Sen187S
Org_num: 70842
All begin N5C86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3981 | restriction endonuclease | |||
| 3982 | R | SenA242IIP (100% identity) | GAGNNNNNNRTAYG | Sen187SORF3983P |
| 3983 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen187SORF3983P |
| 3984 | S | S.Sen237ORF21900P (100% identity) | GAGNNNNNNRTAYG | S.Sen187SORF3983P |
| 3985 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 362 | cell division protein DamX | |||
| 363 | M | M.StyTDamP (100% identity) | GATC | M.Sen187SDamP |
| 364 | ribulose-phosphate 3-epimerase | |||
| 461 | DUF2556 family protein | |||
| 462 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen187SORF462P |
| 463 | DNA-binding transcriptional regulator Fis | |||
| 1858 | PerC family transcriptional regulator | |||
| 1859 | M | M.StyUK1V (100% identity) | GATC | M.Sen187SORF1859P |
| 1860 | RusA family crossover junction | |||
| 1908 | phosphohydrolase | |||
| 1909 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen187SDcmP |
| 1910 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen187SDcmP |
| 1911 | drug/metabolite exporter YedA | |||
| 4013 | BREX system P-loop protein BrxC | |||
| 4014 | RM | StyUK1IV (100% identity) | GATCAG | Sen187SORF4014P |
| 4015 | AAA family ATPase | |||
| plasmid unnamed1 | ||||
| 4837 | 73 aa hypothetical protein | |||
| 4838 | M | M.SenA242ORF4793P (100% identity) | M.Sen187SORF4838P | |
| 4839 | 93 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3545 | small effector SsaA | |||
| 3546 | R | StyUK1IP (99% identity) | CAGAG | Sen187SORF3547P |
| 3547 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen187SORF3547P |
| 3548 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3980 | BrnT family toxin | |||
| 3981 | R | StyUK1MrrP (100% identity) | Sen187SMrr2P | |
| 3982 | type I restriction-modification system | |||
| 4018 | protease Lon-related BREX system protein BrxL | |||
| 4019 | R | StyLTMrrP (100% identity) | Sen187SMrrP | |
| 4020 | AAA domain-containing protein | |||