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Putative Gemmatimonadaceae bacterium 138 RM systems
Ref: Haufschild,T. et al. unpublished
REBASE ref # 37249
Complete sequence: 3,260,361 bp
GenBank #: CP130612
REBASE acronym: Gba138
Org_num: 69604
All begin Strain138_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
999 | 256 aa hypothetical protein | |||
1000 | R | Gba318ORF1007BP (100% identity) | Gba138ORF1007BP | |
1001 | DDE-type integrase/transposase/recombinase | |||
1002 | R | Gba318ORF1007AP (100% identity) | Gba138ORF1007AP | |
1003 | S | S.Gba318ORF1007P (100% identity) | S.Gba138ORF1007P | |
1004 | RhuM family protein | |||
1005 | IS481 family transposase | |||
1006 | RhuM family protein | |||
1007 | M | M.Gba318ORF1007P (100% identity) | M.Gba138ORF1007P | |
1008 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
192 | 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA | |||
193 | M | M.Gba318ORF193P (100% identity) | M.Gba138ORF193P | |
194 | 219 aa hypothetical protein | |||
449 | NYN domain-containing protein | |||
450 | RM | Gba318ORF450P (100% identity) | Gba138ORF450P | |
451 | 267 aa hypothetical protein | |||
738 | glutamate formimidoyltransferase | |||
739 | RM | Gba318ORF739P (100% identity) | Gba138ORF739P | |
740 | inositol monophosphatase family protein | |||
787 | vitamin B12-dependent ribonucleotide reductase | |||
??? | M | M.Gba318ORFAP (100% identity) | M.Gba138ORFAP | |
788 | FRG domain-containing protein | |||
789 | DUF262 domain-containing protein | |||
790 | R | Gba318ORF791P (100% identity) | Gba138ORF791P | |
791 | M | M.Gba318ORF791P (100% identity) | M.Gba138ORF791P | |
792 | V | V.Gba318ORF791P (100% identity) | V.Gba138ORF791P | |
793 | dihydrofolate reductase family protein | |||
2020 | 94 aa hypothetical protein | |||
2021 | RM | Gba318ORF2021P (100% identity) | Gba138ORF2022P | |
2022 | M | M2.Gba318ORF2021P (100% identity) | M2.Gba138ORF2022P | |
2023 | M | M1.Gba318ORF2021P (100% identity) | M1.Gba138ORF2022P | |
2024 | Fic family protein | |||
2125 | DUF4160 domain-containing protein | |||
2126 | R | Gba318ORF2126P (100% identity) | Gba138ORF2127P | |
2127 | M | M.Gba318ORF2126P (100% identity) | M.Gba138ORF2127P | |
2128 | 166 aa hypothetical protein | |||
2166 | type II toxin-antitoxin system RelE/ParE family | |||
2167 | M | M.Gba318ORF2166P (100% identity) | M.Gba138ORF2167P | |
2168 | R | Gba318ORF2166P (100% identity) | Gba138ORF2167P | |
2169 | IS3 family transposase | |||
2550 | 187 aa hypothetical protein | |||
2551 | RM | Gba318ORF2551P (100% identity) | Gba138ORF2551P | |
2552 | DEAD/DEAH box helicase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1942 | DNA-processing protein DprA | |||
1943 | R | Gba318ORF1943P (100% identity) | Gba138ORF1944P | |
1944 | M | M.Gba318ORF1943P (100% identity) | M.Gba138ORF1944P | |
1945 | DUF4391 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1007 | class I SAM-dependent DNA methyltransferase | |||
1008 | R | Gba318MrrP (100% identity) | Gba138MrrP | |
1009 | PIN domain-containing protein |