Bradyrhizobium japonicum USDA 123 |
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Putative Bradyrhizobium japonicum USDA 123 RM systems
Ref: Richards,V.A. et al. unpublished
REBASE ref # 37233
| Sequence length: | GenBank #: | |
| Chromosome: | 10,850,342 bp | CP126018 |
| plasmid pUSDA123-1: | 367,624 bp | CP126019 |
REBASE acronym: Bja123
Org_num: 69478
All begin QIH92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4995 | 74 aa hypothetical protein | |||
| 5000 | R | Bja3GORF24130P (78% identity) | Bja123ORF5025P | |
| 5005 | S | S.ObaASA1ORF29510P (17% identity) | S2.Bja123ORF5025P | |
| 5010 | IS256 family transposase | |||
| 5015 | 98 aa hypothetical protein | |||
| 5020 | S | S.Nar6680ORF641P (26% identity) | S1.Bja123ORF5025P | |
| ??? | M | M.Apa1447ORF2439P (88% identity) | M.Bja123ORF5025P | |
| 5035 | IS3-like element ISRj2 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3350 | 604 aa hypothetical protein | |||
| 3355 | R | BjaJ5ORF27060P (40% identity) | Bja123ORF3360P | |
| 3360 | M | M.BjaJ5ORF27065P (86% identity) | M.Bja123ORF3360P | |
| 3365 | 170 aa hypothetical protein | |||
| 3370 | V | V.BjaJ5ORF27065P (57% identity) | V.Bja123ORF3360P | |
| 3375 | DNA double-strand break repair nuclease NurA | |||
| 5175 | 147 aa hypothetical protein | |||
| 5180 | M | M.Bsp144S4ORF7635P (99% identity) | M.Bja123ORF5180P | |
| 5185 | ISL3 family transposase | |||
| 21480 | 85 aa hypothetical protein | |||
| 21485 | M | M.Bja11LORF28755P (98% identity) | M.Bja123ORF21485P | |
| 21490 | DEAD/DEAH box helicase family protein | |||
| 29945 | alpha/beta hydrolase | |||
| 29950 | R | Bsp63S1MBORF23510P (94% identity) | Bja123ORF29950P | |
| 29955 | glutamine-hydrolyzing GMP synthase | |||
| 37295 | neutral zinc metallopeptidase | |||
| 37300 | M | M.BspNL2ORF11545P (100% identity) | GANTC | M.Bja123ORF37300P |
| 37305 | 108 aa hypothetical protein | |||
| 39710 | DEAD/DEAH box helicase | |||
| 39715 | M | M.Bdi9FORF37025P (99% identity) | M.Bja123ORF39715P | |
| 39720 | 85 aa hypothetical protein | |||
| plasmid pUSDA123-1 | ||||
| 52810 | DISARM system SNF2-like helicase DrmD | |||
| 52815 | RM | Bsp2S1ORF7960P (71% identity) | Bja123ORF52815P | |
| 52820 | IS1380-like element ISBdi2 family transposase | |||
| 54000 | HAD-IIB family hydrolase | |||
| 54005 | M | M.MiwSD4ORFFP (46% identity) | M.Bja123ORF54005P | |
| 54015 | relaxase/mobilization nuclease domain-containing | |||