Serratia marcescens 14VA4 |
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Putative Serratia marcescens 14VA4 RM systems
Ref: Nagano,D.S. et al. unpublished
REBASE ref # 37339
| Sequence length: | GenBank #: | |
| Chromosome: | 5,276,342 bp | AP028480 |
| plasmid p14VA4_1: | 133,752 bp | AP028481 |
| plasmid p14VA4_2: | 88,672 bp | AP028482 |
REBASE acronym: Sma14VA4
Org_num: 70854
All begin SM14VA4_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 47290 | 181 aa hypothetical protein | |||
| 47300 | M | M.Sma0bORF460P (99% identity) | M.Sma14VA4ORF47300P | |
| 47310 | S | S.Sma0bORF460P (100% identity) | S.Sma14VA4ORF47300P | |
| 47320 | R | Sma0bORF460P (100% identity) | Sma14VA4ORF47300P | |
| 47330 | 688 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4630 | integrase | |||
| 4640 | M | M.Sur1089ORF4145P (98% identity) | M.Sma14VA4ORF4640P | |
| 4650 | 126 aa hypothetical protein | |||
| 12060 | 99 aa hypothetical protein | |||
| 12070 | M | M.Ecl73ORF15010P (63% identity) | M.Sma14VA4ORF12070P | |
| 12080 | 53 aa hypothetical protein | |||
| plasmid p14VA4_1 | ||||
| 48610 | 74 aa hypothetical protein | |||
| 48620 | M | M.SmaE13ORF50520P (98% identity) | M.Sma14VA4ORF48620P | |
| 48630 | 108 aa hypothetical protein | |||
| 48940 | 74 aa hypothetical protein | |||
| 48950 | M | M.SmaE36ORF52740P (100% identity) | M.Sma14VA4ORF48950P | |
| 48960 | chromosome partitioning protein ParA | |||
| plasmid p14VA4_2 | ||||
| 50180 | LacI family transcriptional regulator | |||
| 50190 | M | M.SmaUMH1ORF24145P (99% identity) | M.Sma14VA4ORF50190P | |
| 50200 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 47320 | type I restriction-modification system, | |||
| 47330 | R | Sma0bMcrBP (100% identity) | Sma14VA4McrBP | |
| 47340 | R | Sma0bMcrCP (100% identity) | Sma14VA4McrCP | |
| 47350 | 372 aa hypothetical protein | |||
| 47340 | mcrBC 5-methylcytosine restriction system | |||
| 47350 | R | Sma3ORF2260P (97% identity) | Sma14VA4ORF47350P | |
| 47360 | 102 aa hypothetical protein | |||