Serratia marcescens 10VA1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Serratia marcescens 10VA1 RM systems
Ref: Nagano,D.S. et al. unpublished
REBASE ref # 37339
Complete sequence: 5,225,038 bp
GenBank #: AP028462
REBASE acronym: Sma10VA1
Org_num: 70846
All begin SM10VA1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16250 | oxalate decarboxylase OxdD | |||
| 16260 | R | SspM0706ORF2267P (100% identity) | DTAGNNNNNNNRTCC | Sma10VA1ORF16270P |
| 16270 | M | M.SspM0706ORF2267P (100% identity) | DTAGNNNNNNNRTCC | M.Sma10VA1ORF16270P |
| 16280 | S | S.SspM0706ORF2267P (100% identity) | DTAGNNNNNNNRTCC | S.Sma10VA1ORF16270P |
| 16290 | 367 aa hypothetical protein | |||
| 46180 | membrane protein | |||
| 46190 | M | M.SspM0706ORF469P (100% identity) | CRAANNNNNNNRTGNNC | M.Sma10VA1ORF46190P |
| 46200 | S | S.SspM0706ORF469P (100% identity) | CRAANNNNNNNRTGNNC | S.Sma10VA1ORF46190P |
| 46210 | R | SspM0706ORF469P (100% identity) | CRAANNNNNNNRTGNNC | Sma10VA1ORF46190P |
| 46220 | 688 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23190 | 279 aa hypothetical protein | |||
| 23200 | M | M.SmaQC15ORF11480P (99% identity) | M.Sma10VA1ORF23200P | |
| 23210 | 39 aa hypothetical protein | |||
| 38700 | ribulose-phosphate 3-epimerase | |||
| 38710 | M | M.SspYD25DamP (100% identity) | GATC | M.Sma10VA1DamP |
| 38720 | 336 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 46210 | type I restriction-modification system, | |||
| 46220 | R | SspM0706McrBP (100% identity) | Sma10VA1McrBP | |
| 46230 | R | SspM0706McrCP (100% identity) | Sma10VA1McrCP | |
| 46240 | 372 aa hypothetical protein | |||
| 46230 | mcrBC 5-methylcytosine restriction system | |||
| 46240 | R | SspM0706ORF474P (100% identity) | Sma10VA1ORF46240P | |
| 46250 | 105 aa hypothetical protein | |||