Serratia marcescens QC11 |
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Putative Serratia marcescens QC11 RM systems
Ref: Nagano,D.S. et al. unpublished
REBASE ref # 37339
| Sequence length: | GenBank #: | |
| Chromosome: | 5,269,966 bp | AP028561 |
| plasmid pQC11_1: | 244,465 bp | AP028562 |
| plasmid pQC11_2: | 200,434 bp | AP028563 |
| plasmid pQC11_5: | 36,524 bp | AP028566 |
REBASE acronym: SmaQC11
Org_num: 70896
All begin SMQC11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 47180 | 406 aa hypothetical protein | |||
| 47190 | R | SmaQC08ORF47580P (100% identity) | SmaQC11ORF47230P | |
| 47200 | 391 aa hypothetical protein | |||
| ??? | S | S.SmaQC08ORF47580P (100% identity) | S.SmaQC11ORF47230P | |
| 47220 | IS5 family transposase | |||
| 47230 | M | M.SmaQC08ORF47580P (100% identity) | M.SmaQC11ORF47230P | |
| 47240 | Mrr restriction system protein | |||
| plasmid pQC11_2 | ||||
| 51920 | metal-dependent hydrolase | |||
| 51930 | R | SmaKC004ORF49070P (100% identity) | SmaQC11ORF51970P | |
| 51940 | 227 aa hypothetical protein | |||
| ??? | S | S3.SmaKC004ORF49070P (34% identity) | S3.SmaQC11ORF51970P | |
| 51950 | IS5 family transposase | |||
| 51960 | S | S1.Eco3052ORF11085P (63% identity) | S1.SmaQC11ORF51970P | |
| 51970 | M | M.SmaKC004ORF49070P (100% identity) | M.SmaQC11ORF51970P | |
| 51980 | 102 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4340 | 120 aa hypothetical protein | |||
| ??? | M | M.SmaQC08ORFAP (100% identity) | M.SmaQC11ORFAP | |
| 4350 | 52 aa hypothetical protein | |||
| 37950 | 306 aa hypothetical protein | |||
| 37960 | M | M.SmaQC08ORF38340P (100% identity) | M.SmaQC11ORF37960P | |
| 39610 | ribulose-phosphate 3-epimerase | |||
| 39620 | M | M.SspNIH1Dam (100% identity) | GATC | M.SmaQC11DamP |
| 39630 | 337 aa hypothetical protein | |||
| plasmid pQC11_1 | ||||
| 49930 | 55 aa hypothetical protein | |||
| 49940 | M | M.YpsF1ORFCP (48% identity) | M.SmaQC11ORF49940BP | |
| 49950 | 115 aa hypothetical protein | |||
| 49960 | transposase | |||
| 49970 | M | M.SmaQC08ORF50280AP (100% identity) | M.SmaQC11ORF49940AP | |
| 49980 | nuclease | |||
| 50610 | 108 aa hypothetical protein | |||
| 50620 | M | M.YpsF1ORFBP (100% identity) | M.SmaQC11ORF50620P | |
| 50630 | 202 aa hypothetical protein | |||
| 50880 | DNA-binding protein | |||
| 50890 | M | M.SmaQC08ORF51190P (100% identity) | M.SmaQC11ORF50890P | |
| 50900 | 284 aa hypothetical protein | |||
| plasmid pQC11_2 | ||||
| 52790 | 73 aa hypothetical protein | |||
| 52800 | M | M.SmaKC057ORF47840P (100% identity) | M.SmaQC11ORF52800P | |
| 52810 | 76 aa hypothetical protein | |||
| plasmid pQC11_5 | ||||
| 55220 | 187 aa hypothetical protein | |||
| 55230 | M | M.KpnB26CORFCP (98% identity) | M.SmaQC11ORF55230P | |
| 55240 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 47230 | site-specific DNA-methyltransferase type I | |||
| 47240 | R | SmaQC08MrrP (100% identity) | SmaQC11MrrP | |
| 47250 | 372 aa hypothetical protein | |||