Serratia marcescens QC08 |
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Putative Serratia marcescens QC08 RM systems
Ref: Nagano,D.S. et al. unpublished
REBASE ref # 37339
| Sequence length: | GenBank #: | |
| Chromosome: | 5,305,221 bp | AP028556 |
| plasmid pQC08_1: | 243,500 bp | AP028557 |
REBASE acronym: SmaQC08
Org_num: 70895
All begin SMQC08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 47530 | 406 aa hypothetical protein | |||
| 47540 | R | SmaQC11ORF47230P (100% identity) | SmaQC08ORF47580P | |
| 47550 | 391 aa hypothetical protein | |||
| ??? | S | S.SmaQC11ORF47230P (100% identity) | S.SmaQC08ORF47580P | |
| 47570 | IS5 family transposase | |||
| 47580 | M | M.SmaQC11ORF47230P (100% identity) | M.SmaQC08ORF47580P | |
| 47590 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4330 | 120 aa hypothetical protein | |||
| ??? | M | M.SmaQC11ORFAP (100% identity) | M.SmaQC08ORFAP | |
| 4340 | 52 aa hypothetical protein | |||
| 38330 | 306 aa hypothetical protein | |||
| 38340 | M | M.SmaQC11ORF37960P (100% identity) | M.SmaQC08ORF38340P | |
| 39970 | ribulose-phosphate 3-epimerase | |||
| 39980 | M | M.SspNIH1Dam (100% identity) | GATC | M.SmaQC08DamP |
| 39990 | 337 aa hypothetical protein | |||
| plasmid pQC08_1 | ||||
| 50270 | 55 aa hypothetical protein | |||
| 50280 | M | M.YpsF1ORFCP (48% identity) | M.SmaQC08ORF50280BP | |
| 50290 | 115 aa hypothetical protein | |||
| 50300 | transposase | |||
| 50310 | M | M.SmaQC11ORF49940AP (100% identity) | M.SmaQC08ORF50280AP | |
| 50320 | nuclease | |||
| 50910 | 108 aa hypothetical protein | |||
| 50920 | M | M.YpsF1ORFBP (100% identity) | M.SmaQC08ORF50920P | |
| 50930 | 202 aa hypothetical protein | |||
| 51180 | DNA-binding protein | |||
| 51190 | M | M.SmaQC11ORF50890P (100% identity) | M.SmaQC08ORF51190P | |
| 51200 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 47580 | site-specific DNA-methyltransferase type I | |||
| 47590 | R | SmaQC11MrrP (100% identity) | SmaQC08MrrP | |
| 47600 | 372 aa hypothetical protein | |||