Klebsiella pneumoniae FJ8-TC |
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Putative Klebsiella pneumoniae FJ8-TC RM systems
Ref: Liu,C. et al. unpublished
REBASE ref # 37255
| Sequence length: | GenBank #: | |
| Chromosome: | 5,533,254 bp | CP092272 |
| plasmid p1: | 236,626 bp | CP092273 |
| plasmid p2: | 166,543 bp | CP092274 |
REBASE acronym: KpnTC
Org_num: 69615
All begin MHK76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p1 | ||||
| 27385 | IS6-like element IS26 family transposase | |||
| 27390 | R | KpnT877ORF26965P (100% identity) | GTGANNNNNNNTGG | KpnTCORF27410P |
| 27395 | cold shock domain-containing protein | |||
| 27400 | YecA family protein | |||
| 27405 | S | S.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | S.KpnTCORF27410P |
| 27410 | M | M.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | M.KpnTCORF27410P |
| 27415 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.KspC31DamP (100% identity) | GATC | M.KpnTCDamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 6180 | TraR/DksA family transcriptional regulator | |||
| 6185 | M | M.Ksp1927ORF4530P (100% identity) | GATC | M.KpnTCORF6185P |
| 6190 | replication endonuclease | |||
| 6935 | 80 aa hypothetical protein | |||
| 6940 | M | M.KpnvKP8ORFDP (100% identity) | GATC | M.KpnTCORF6940P |
| 6945 | 220 aa hypothetical protein | |||
| 15760 | regulator | |||
| 15765 | M | M.Ksp1927ORF14405P (100% identity) | GATC | M.KpnTCORF15765P |
| 15770 | tyrosine-type recombinase/integrase | |||
| 18330 | replication endonuclease | |||
| 18335 | M | M.Ksp1927ORF17200P (100% identity) | GATC | M.KpnTCORF18335P |
| 18340 | TraR/DksA family transcriptional regulator | |||
| 23750 | HNH endonuclease | |||
| 23755 | R | KpnvKP9ORFAP (100% identity) | KpnTCORF23755P | |
| 23760 | type VI secretion system tube protein Hcp | |||
| 24575 | DNA topoisomerase III | |||
| 24580 | M | M.Ssp405ORF8290P (100% identity) | M.KpnTCORF24580P | |
| 24585 | 185 aa hypothetical protein | |||
| plasmid p2 | ||||
| 28690 | 97 aa hypothetical protein | |||
| 28695 | M | M.Xca80ORFEP (100% identity) | M.KpnTCORF28695P | |
| 28700 | 73 aa hypothetical protein | |||
| 29200 | 56 aa hypothetical protein | |||
| 29205 | M | M.SmaQC11ORF52800P (100% identity) | M.KpnTCORF29205P | |
| 29210 | 73 aa hypothetical protein | |||
| 29470 | 73 aa hypothetical protein | |||
| 29475 | M | M.YpeZORF72P (100% identity) | M.KpnTCORF29475P | |
| 29480 | SOS response-associated peptidase family | |||