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Putative Escherichia coli MS20649 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
Sequence length: | GenBank #: | |
Chromosome: | 4,825,997 bp | CP082087 |
plasmid pMS20649B: | 59,165 bp | CP082089 |
plasmid pMS20649C: | 57,134 bp | CP082090 |
REBASE acronym: Eco20649
Org_num: 69580
All begin K6126_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2545 | 67 aa hypothetical protein | |||
2550 | M | M.EcoNC22ORF10915P (100% identity) | M.Eco20649ORF2550P | |
2555 | 63 aa hypothetical protein | |||
4305 | TraR/DksA family transcriptional regulator | |||
4310 | M | M.EcoO78ORF7950P (100% identity) | GATC | M.Eco20649ORF4310P |
4315 | 273 aa hypothetical protein | |||
9605 | drug/metabolite exporter YedA | |||
9610 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco20649DcmP |
9615 | M | M.EcoVEV11MDcmP (100% identity) | CCWGG | M.Eco20649DcmP |
9620 | phosphohydrolase | |||
11020 | 89 aa hypothetical protein | |||
??? | M | M.EcoVEV10FORF15720P (100% identity) | M.Eco20649ORF11025P | |
11035 | transcriptional regulator | |||
13190 | replication endonuclease | |||
13195 | M | M.Sen24760ORF10410P (100% identity) | GATC | M.Eco20649ORF13195P |
13200 | TraR/DksA family transcriptional regulator | |||
16940 | DNA-binding transcriptional regulator Fis | |||
16945 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco20649ORF16945P |
16950 | DUF2556 family protein | |||
17565 | ribulose-phosphate 3-epimerase | |||
17570 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco20649DamP |
17575 | cell division protein DamX | |||
21135 | PerC family transcriptional regulator | |||
21140 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco20649ORF21140P |
21145 | LexA family transcriptional regulator | |||
22580 | IS21-like element ISEc12 family helper ATPase | |||
22585 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco20649ORF22585P |
22590 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco20649ORF22585P |
22595 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco20649ORF22585P |
22600 | McrC family protein | |||
plasmid pMS20649B | ||||
23820 | 73 aa hypothetical protein | |||
23825 | M | M.Sso866ORF27155P (100% identity) | M.Eco20649ORF23825P | |
23830 | 91 aa hypothetical protein | |||
plasmid pMS20649C | ||||
24360 | recombinase family protein | |||
24055 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco20649ORF24060P |
24060 | M | M.Sso12984ORF5284P (100% identity) | CCWGG | M.Eco20649ORF24060P |
24065 | IS1 family transposase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10955 | IS3-like element IS2 family transposase | |||
10960 | R | Ecochi7122GmrSDP (100% identity) | Eco20649GmrSDP | |
10965 | recombinase family protein | |||
22595 | Alw26I/Eco31I/Esp3I family type II restriction | |||
22600 | R | EcosS9McrCP (100% identity) | Eco20649McrCP | |
22605 | R | EcosS3McrBP (100% identity) | Eco20649McrBP | |
22610 | glycosyltransferase |