Escherichia coli MS20653 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MS20653 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
Complete sequence: 5,189,297 bp
GenBank #: CP082085
REBASE acronym: Eco20653
Org_num: 69581
All begin K6127_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24765 | endoribonuclease SymE | |||
| 24770 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco20653ORF24775P |
| 24775 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco20653ORF24775P |
| 24780 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco20653ORF24775P |
| 24785 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6330 | TrmB family transcriptional regulator | |||
| 6335 | M | M.SboBSORF1444P (100% identity) | A | M.Eco20653ORF6335P |
| 6355 | DUF1737 domain-containing protein | |||
| 13465 | PerC family transcriptional regulator | |||
| 13470 | M | M.EcoPYO2ORF17175P (100% identity) | M.Eco20653ORF13470P | |
| 13475 | DUF1382 family protein | |||
| 14280 | LexA family transcriptional regulator | |||
| 14285 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco20653ORF14285P |
| 14290 | PerC family transcriptional regulator | |||
| 17950 | DNA-binding transcriptional regulator Fis | |||
| 17955 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco20653ORF17955P |
| 17960 | DUF2556 family protein | |||
| 18550 | ribulose-phosphate 3-epimerase | |||
| 18555 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco20653DamP |
| 18560 | cell division protein DamX | |||
| 22440 | 330 aa hypothetical protein | |||
| 22445 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco20653ORF22445P |
| 22450 | LexA family transcriptional regulator | |||
| 22480 | 67 aa hypothetical protein | |||
| 22485 | M | M.Sso63633ORF22290P (100% identity) | M.Eco20653ORF22485P | |
| 22490 | class II holin family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14080 | DinI-like family protein | |||
| 14085 | R | EspFAAGmrSDP (100% identity) | Eco20653GmrSDP | |
| 14090 | recombinase family protein | |||
| 24780 | type I restriction-modification system | |||
| 24785 | R | EcosS1MrrP (100% identity) | Eco20653MrrP | |
| 24790 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5470 | recombination protein NinB | |||
| 5475 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco20653ORF5475P |
| 5480 | NinE family protein | |||