Shigella flexneri 1b A-10383 |
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Putative Shigella flexneri 1b A-10383 RM systems
Ref: Neemuchwala,A. et al. unpublished
REBASE ref # 37197
| Sequence length: | GenBank #: | |
| Chromosome: | 4,576,609 bp | CP130063 |
| plasmid pA-10383: | 94,752 bp | CP130065 |
| plasmid pA-10383A: | 218,629 bp | CP130064 |
REBASE acronym: Sfl3
Org_num: 69345
All begin QS169_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20010 | IS3-like element IS2 family transposase | |||
| 20015 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | Sfl3ORF20020P |
| 20020 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.Sfl3ORF20020P |
| 20025 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.Sfl3ORF20020P |
| 20030 | endoribonuclease SymE | |||
| plasmid pA-10383 | ||||
| 25050 | IS6-like element IS26 family transposase | |||
| 25055 | M | M.SflFF34ORF9300P (42% identity) | M.Sfl3ORF25055P | |
| 25060 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2365 | DUF2556 family protein | |||
| 2370 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl3ORF2370P |
| 2375 | DNA-binding transcriptional regulator Fis | |||
| 8835 | phosphohydrolase | |||
| 8840 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl3DcmP |
| 8845 | V | V.SflTDcmP (100% identity) | CCWGG | V.Sfl3DcmP |
| 8850 | drug/metabolite exporter YedA | |||
| plasmid pA-10383 | ||||
| 24625 | IS1 family transposase | |||
| 24630 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Sfl3ORF24630P |
| 24635 | R | YpsR1ORFAP (100% identity) | CCWGG | Sfl3ORF24630P |
| 24640 | EAL domain-containing protein | |||
| 24855 | 103 aa hypothetical protein | |||
| 24860 | M | M.Sfl7ORF23565P (100% identity) | M.Sfl3ORF24860P | |
| 24865 | 73 aa hypothetical protein | |||
| plasmid pA-10383A | ||||
| 24185 | 103 aa hypothetical protein | |||
| 24190 | M | M.SflP099ORF24190P (100% identity) | M.Sfl3ORF24190P | |
| 24195 | 73 aa hypothetical protein | |||