Shigella flexneri 1b A-6817 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Shigella flexneri 1b A-6817 RM systems
Ref: Neemuchwala,A. et al. unpublished
REBASE ref # 37197
| Sequence length: | GenBank #: | |
| Chromosome: | 4,575,404 bp | CP130061 |
| plasmid pA6817: | 150,284 bp | CP130062 |
REBASE acronym: Sfl7
Org_num: 69346
All begin QS140_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20020 | IS3-like element IS2 family transposase | |||
| 20025 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | Sfl7ORF20030P |
| 20030 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.Sfl7ORF20030P |
| 20035 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.Sfl7ORF20030P |
| 20040 | endoribonuclease SymE | |||
| plasmid pA6817 | ||||
| 24155 | IS6-like element IS26 family transposase | |||
| 24160 | M | M.SflFF34ORF9300P (42% identity) | M.Sfl7ORF24160P | |
| 24165 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2370 | DUF2556 family protein | |||
| 2375 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl7ORF2375P |
| 2380 | DNA-binding transcriptional regulator Fis | |||
| 8855 | phosphohydrolase | |||
| 8860 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl7DcmP |
| 8865 | V | V.SflTDcmP (100% identity) | CCWGG | V.Sfl7DcmP |
| 8870 | drug/metabolite exporter YedA | |||
| plasmid pA6817 | ||||
| 23330 | IS1 family transposase | |||
| 23335 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Sfl7ORF23335P |
| 23340 | R | YpsR1ORFAP (100% identity) | CCWGG | Sfl7ORF23335P |
| 23345 | EAL domain-containing protein | |||
| 23560 | 103 aa hypothetical protein | |||
| 23565 | M | M.Sfl3ORF24860P (100% identity) | M.Sfl7ORF23565P | |
| 23570 | 73 aa hypothetical protein | |||
| 23895 | 73 aa hypothetical protein | |||
| 23900 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Sfl7ORF23900P |
| 23905 | 103 aa hypothetical protein | |||