Salmonella enterica subsp. diarizonae PB5 |
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Putative Salmonella enterica subsp. diarizonae PB5 RM systems
Ref: Lu,P.X. and Li,R. unpublished
REBASE ref # 37194
| Sequence length: | GenBank #: | |
| Chromosome: | 4,976,875 bp | CP117188 |
| plasmid unnamed1: | 205,161 bp | CP117189 |
| plasmid unnamed2: | 69,007 bp | CP117190 |
| plasmid unnamed3: | 49,855 bp | CP117191 |
REBASE acronym: SenB5
Org_num: 69315
All begin PQC30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20770 | conjugal transfer protein TraG N-terminal | |||
| 20775 | S | S1.Sen10381IVP (98% identity) | S3.SenB5ORF20800P | |
| 20780 | R | SensS499ORF20365P (100% identity) | SenB5ORF20800P | |
| 20785 | S | S2.SensS499ORF20365P (100% identity) | S2.SenB5ORF20800P | |
| 20790 | IS5-like element IS903B family transposase | |||
| 20795 | S | S1.SensS499ORF20365P (100% identity) | S1.SenB5ORF20800P | |
| 20800 | M | M.SensS499ORF20365P (100% identity) | M.SenB5ORF20800P | |
| 20805 | HrgA protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2145 | DUF2556 family protein | |||
| 2150 | M | M.SensS499ORF2140P (100% identity) | ATGCAT | M.SenB5ORF2150P |
| 2155 | DNA-binding transcriptional regulator Fis | |||
| 9550 | phosphohydrolase | |||
| 9555 | M | M.SensS499DcmP (100% identity) | CCWGG | M.SenB5DcmP |
| 9560 | V | V.SensS499DcmP (100% identity) | CCWGG | V.SenB5DcmP |
| 9565 | drug/metabolite exporter YedA | |||
| 20805 | HrgA protein | |||
| 20810 | R | SensS499ORF20375P (100% identity) | SenB5ORF20810P | |
| 20815 | 97 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 24810 | 100 aa hypothetical protein | |||
| 24815 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.SenB5ORF24815P |
| 24820 | 143 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25155 | 97 aa hypothetical protein | |||
| 25160 | M | M.SensS499ORF26615P (100% identity) | M.SenB5ORF25160P | |
| 25165 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 25535 | 77 aa hypothetical protein | |||
| 25540 | M | M.SensS499ORF26180P (100% identity) | M.SenB5ORF25540P | |
| 25545 | 102 aa hypothetical protein | |||
| 25570 | DUF4406 domain-containing protein | |||
| 25575 | M | M.SensS499ORF26145P (100% identity) | M.SenB5ORF25575P | |
| 25580 | HNH endonuclease signature motif containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18560 | small effector SsaA | |||
| 18565 | R | SensS499ORF18165P (100% identity) | CAGAG | SenB5ORF18570P |
| 18570 | M | M.SensS499ORF18165P (100% identity) | CAGAG | M.SenB5ORF18570P |
| 18575 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20715 | 1037 aa hypothetical protein | |||
| 20720 | R | SensS499McrCP (100% identity) | SenB5McrCP | |
| 20725 | R | SensS499McrBP (100% identity) | SenB5McrBP | |
| 20730 | IS3 family transposase | |||