Clostridium perfringens TS1 |
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Putative Clostridium perfringens TS1 RM systems
Ref: Ueda,K. et al. BMC Genomics 23 (1), 226 (2022)
REBASE ref # 37093
| Sequence length: | GenBank #: | |
| Chromosome: | 3,418,761 bp | AP024973 |
| plasmid pCP-TS1: | 54,478 bp | AP024974 |
| plasmid pCP-TS1-2: | 35,499 bp | AP024975 |
REBASE acronym: CpeTS1
Org_num: 68873
All begin CPBEC2_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7690 | peptide methionine sulfoxide reductase MsrA | |||
| 7700 | M | M.CpeCQ92ORF15075P (100% identity) | M.CpeTS1ORF7700P | |
| 7710 | phage infection protein | |||
| 18310 | 73 aa hypothetical protein | |||
| 18320 | R | CpeCQ92ORF5355P (100% identity) | GATC | CpeTS1ORF18330P |
| 18330 | M | M.CpeCQ92ORF5355P (100% identity) | GATC | M.CpeTS1ORF18330P |
| 18340 | 629 aa hypothetical protein | |||
| 18370 | ATPase | |||
| 18380 | R | Cpe256ORF26340P (100% identity) | CpeTS1ORF18420P | |
| 18390 | 311 aa hypothetical protein | |||
| 18400 | 260 aa hypothetical protein | |||
| 18410 | 422 aa hypothetical protein | |||
| 18420 | M | M.CpeCQ92ORF5400P (100% identity) | M.CpeTS1ORF18420P | |
| 18430 | 147 aa hypothetical protein | |||
| plasmid pCP-TS1 | ||||
| 30110 | ImmA/IrrE family metallo-endopeptidase PcpR | |||
| 30120 | R | CpeS1ORF28860P (100% identity) | CTGCAG | CpeTS1ORF30130P |
| 30130 | M | M.CpeCQ92ORF16070P (100% identity) | CTGCAG | M.CpeTS1ORF30130P |
| 30140 | PcpP | |||
| plasmid pCP-TS1-2 | ||||
| 30770 | 77 aa hypothetical protein | |||
| 30780 | M | M.CpeNE18ORF1915P (95% identity) | M.CpeTS1ORF30780P | |
| 30790 | single-stranded DNA-binding protein 3 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18070 | 103 aa hypothetical protein | |||
| 18080 | R | Cpe3McrBP (100% identity) | CpeTS1McrBP | |
| 18090 | R | CpeCQ92McrCP (100% identity) | CpeTS1McrCP | |
| 18100 | 127 aa hypothetical protein | |||