Salmonella enterica subsp. enterica serovar Infantis R13.1986 |
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Putative Salmonella enterica subsp. enterica serovar Infantis R13.1986 RM systems
Ref: Chiou,C.-S. et al. unpublished
REBASE ref # 36034
| Sequence length: | GenBank #: | |
| Chromosome: | 4,711,862 bp | CP129384 |
| plasmid pR13.1986_108k: | 108,036 bp | CP129385 |
| plasmid pR13.1986_94k: | 94,398 bp | CP129386 |
REBASE acronym: Sen86
Org_num: 69325
All begin ETE97_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3200 | tyrosine-type recombinase/integrase | |||
| 3205 | R | SinI (100% identity) | GGWCC | Sen86ORF3210P |
| 3210 | M | M.SinI (99% identity) | GGWCC | M.Sen86ORF3210P |
| 3215 | IS3 family transposase | |||
| 13315 | drug/metabolite exporter YedA | |||
| 13320 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen86DcmP |
| 13325 | M | M.SenU4DcmP (100% identity) | CCWGG | M.Sen86DcmP |
| 13330 | phosphohydrolase | |||
| 13400 | integrase domain-containing protein | |||
| 13405 | M | M.SensSZL31ORF10310P (100% identity) | M.Sen86ORF13405P | |
| 13410 | ParA family protein | |||
| 20335 | DNA-binding transcriptional regulator Fis | |||
| 20340 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen86ORF20340P |
| 20345 | DUF2556 family protein | |||
| 22625 | recombinase family protein | |||
| 22630 | M | M.SspW3ORF4074P (100% identity) | CTGCAG | M.Sen86ORF22630P |
| 22635 | R | Sen553ORF3809P (100% identity) | CTGCAG | Sen86ORF22630P |
| 22640 | 214 aa hypothetical protein | |||
| plasmid pR13.1986_108k | ||||
| 23095 | SOS response-associated peptidase family | |||
| 23100 | M | M.EkoS19ORF24820P (100% identity) | M.Sen86ORF23100P | |
| 23105 | 73 aa hypothetical protein | |||
| plasmid pR13.1986_94k | ||||
| 23540 | 73 aa hypothetical protein | |||
| 23545 | M | M.SspPIBORF23080P (100% identity) | M.Sen86ORF23545P | |
| 23550 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5520 | MFS transporter | |||
| 5525 | M | M.SensSZL31ORF18150P (100% identity) | CAGAG | M.Sen86ORF5525P |
| 5530 | R | SensSZL31ORF18150P (100% identity) | CAGAG | Sen86ORF5525P |
| 5535 | small effector SsaA | |||