Salmonella enterica subsp. enterica serovar 4,[5],12:i:- H1 - 120 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- H1 - 120 RM systems
Ref: Supa-Amornkul,S. et al. Sci Rep 13 (1), 7080 (2023)
REBASE ref # 37195
| Sequence length: | GenBank #: | |
| Chromosome: | 4,991,640 bp | CP092491 |
| plasmid pIncHI2A_H1-120_RI1: | 222,126 bp | CP092492 |
REBASE acronym: Sen120
Org_num: 69320
All begin MJ557_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24100 | endoribonuclease SymE | |||
| 24105 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen120ORF24110P |
| 24110 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen120ORF24110P |
| 24115 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen120ORF24110P |
| 24120 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10060 | drug/metabolite exporter YedA | |||
| 10065 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen120DcmP |
| 10070 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen120DcmP |
| 10075 | phosphohydrolase | |||
| 10320 | RusA family crossover junction | |||
| 10325 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen120ORF10325P |
| 10330 | PerC family transcriptional regulator | |||
| 13720 | YqaJ viral recombinase family protein | |||
| 13725 | M | M.Sen83530ORF12585P (95% identity) | M.Sen120ORF13725P | |
| 13730 | DUF4060 family protein | |||
| 14930 | IS6-like element IS26 family transposase | |||
| 14935 | M | M.StyCORF187P (49% identity) | M.Sen120ORF14935P | |
| 14940 | thermonuclease family protein | |||
| 16695 | replication endonuclease | |||
| 16700 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen120ORF16700P |
| 16705 | DUF2732 domain-containing protein | |||
| 17615 | DNA-binding transcriptional regulator Fis | |||
| 17620 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen120ORF17620P |
| 17625 | DUF2556 family protein | |||
| 22035 | PerC family transcriptional regulator | |||
| 22040 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen120ORF22040P |
| 22045 | LexA family transcriptional regulator | |||
| 23950 | AAA family ATPase | |||
| 23955 | RM | StyUK1IV (100% identity) | GATCAG | Sen120ORF23955P |
| 23960 | BREX system P-loop protein BrxC | |||
| plasmid pIncHI2A_H1-120_RI1 | ||||
| 24525 | 48 aa hypothetical protein | |||
| 24530 | M | M.Sen27951ORFMBP (99% identity) | M.Sen120ORF24530P | |
| 24535 | IS5-like element IS903B family transposase | |||
| 24535 | IS5-like element IS903B family transposase | |||
| 24540 | M | M.Sen27951ORFMAP (100% identity) | M.Sen120ORF24540P | |
| 24545 | 202 aa hypothetical protein | |||
| 24650 | DNA-binding protein | |||
| 24655 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen120ORF24655P |
| 24660 | 277 aa hypothetical protein | |||
| 25235 | 55 aa hypothetical protein | |||
| 25240 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen120ORF25240P |
| 25245 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1930 | MFS transporter | |||
| 1935 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen120ORF1935P |
| 1940 | R | StyUK1IP (99% identity) | CAGAG | Sen120ORF1935P |
| 1945 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23925 | AAA domain-containing protein | |||
| 23930 | R | StyLTMrrP (100% identity) | Sen120MrrP | |
| 23935 | protease Lon-related BREX system protein BrxL | |||
| 24115 | type I restriction-modification system | |||
| 24120 | R | StyUK1MrrP (100% identity) | Sen120Mrr2P | |
| 24125 | BrnT family toxin | |||