Salmonella enterica subsp. enterica serovar 4,[5],12:- H1-012 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:- H1-012 RM systems
Ref: Supa-Amornkul,S. et al. Sci Rep 13 (1), 7080 (2023)
REBASE ref # 37195
| Sequence length: | GenBank #: | |
| Chromosome: | 5,039,354 bp | CP091866 |
| plasmid pIncC-FII_H1-012_RI1: | 180,872 bp | CP091867 |
REBASE acronym: Sen012
Org_num: 69318
All begin L9L31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24425 | endoribonuclease SymE | |||
| 24430 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen012ORF24435P |
| 24435 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen012ORF24435P |
| 24440 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen012ORF24435P |
| 24445 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10310 | drug/metabolite exporter YedA | |||
| 10315 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen012DcmP |
| 10320 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen012DcmP |
| 10325 | phosphohydrolase | |||
| 10570 | RusA family crossover junction | |||
| 10575 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen012ORF10575P |
| 10580 | PerC family transcriptional regulator | |||
| 13905 | DUF551 domain-containing protein | |||
| 13910 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen012ORF13910P |
| 13915 | ead/Ea22-like family protein | |||
| 16995 | replication endonuclease | |||
| 17000 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen012ORF17000P |
| 17005 | DUF2732 domain-containing protein | |||
| 17915 | DNA-binding transcriptional regulator Fis | |||
| 17920 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen012ORF17920P |
| 17925 | DUF2556 family protein | |||
| 22340 | PerC family transcriptional regulator | |||
| 22345 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen012ORF22345P |
| 22350 | LexA family transcriptional regulator | |||
| 24275 | AAA family ATPase | |||
| 24280 | RM | StyUK1IV (100% identity) | GATCAG | Sen012ORF24280P |
| 24285 | BREX system P-loop protein BrxC | |||
| plasmid pIncC-FII_H1-012_RI1 | ||||
| 25380 | 102 aa hypothetical protein | |||
| 25385 | M | M.SenST46ORF25580P (100% identity) | M.Sen012ORF25385P | |
| 25390 | 73 aa hypothetical protein | |||
| 25760 | IS1 family transposase | |||
| 25765 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen012ORF25765P |
| 25770 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen012ORF25765P |
| 25775 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2145 | MFS transporter | |||
| 2150 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen012ORF2150P |
| 2155 | R | StyUK1IP (99% identity) | CAGAG | Sen012ORF2150P |
| 2160 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24250 | AAA domain-containing protein | |||
| 24255 | R | StyLTMrrP (100% identity) | Sen012MrrP | |
| 24260 | protease Lon-related BREX system protein BrxL | |||
| 24440 | type I restriction-modification system | |||
| 24445 | R | StyUK1MrrP (100% identity) | Sen012Mrr2P | |
| 24450 | BrnT family toxin | |||