Salmonella enterica subsp. enterica BC06 |
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Putative Salmonella enterica subsp. enterica BC06 RM systems
Ref: Onken,A. et al. unpublished
REBASE ref # 37193
Complete sequence: 4,807,710 bp
GenBank #: CP129109
REBASE acronym: Sen06
Org_num: 69317
All begin QS119_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19300 | restriction endonuclease | |||
| 19305 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen06ORF19310P |
| 19310 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen06ORF19310P |
| 19315 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen06ORF19310P |
| 19320 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | cell division protein DamX | |||
| 1735 | M | M.StyTDamP (100% identity) | GATC | M.Sen06DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2220 | DUF2556 family protein | |||
| 2225 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen06ORF2225P |
| 2230 | DNA-binding transcriptional regulator Fis | |||
| 9100 | DUF4060 family protein | |||
| 9105 | M | M.StyTORF1926P (95% identity) | M.Sen06ORF9105P | |
| 9110 | DGQHR domain-containing protein | |||
| 9165 | ead/Ea22-like family protein | |||
| 9170 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen06ORF9170P |
| 9175 | DUF550 domain-containing protein | |||
| 14435 | drug/metabolite exporter YedA | |||
| 14440 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen06DcmP |
| 14445 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen06DcmP |
| 14450 | phosphohydrolase | |||
| 19440 | 91 aa hypothetical protein | |||
| 19445 | R | Senst12ORF9665P (100% identity) | Sen06ORF19445P | |
| 19450 | 64 aa hypothetical protein | |||
| 20530 | 3-5 exonuclease | |||
| 20535 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen06ORF20535P |
| 20540 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6170 | MFS transporter | |||
| 6175 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen06ORF6175P |
| 6180 | R | StyTORF2507P (99% identity) | CAGAG | Sen06ORF6175P |
| 6185 | small effector SsaA | |||
| 14515 | SpnT protein | |||
| 14520 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Sen06ORF14520P |
| 14525 | R | StyTORF872P (100% identity) | CAAACC | Sen06ORF14520P |
| 14530 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19295 | BrnT family toxin | |||
| 19300 | R | StyTMrrP (100% identity) | Sen06MrrP | |
| 19305 | type I restriction-modification system | |||