Salmonella enterica subsp. enterica BC04 |
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Putative Salmonella enterica subsp. enterica BC04 RM systems
Ref: Onken,A. et al. unpublished
REBASE ref # 37193
Complete sequence: 4,807,678 bp
GenBank #: CP129110
REBASE acronym: Sen4
Org_num: 69316
All begin QS194_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19215 | restriction endonuclease | |||
| 19220 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen4ORF19225P |
| 19225 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen4ORF19225P |
| 19230 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen4ORF19225P |
| 19235 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | cell division protein DamX | |||
| 1735 | M | M.StyTDamP (100% identity) | GATC | M.Sen4DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 9140 | ead/Ea22-like family protein | |||
| 9145 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen4ORF9145P |
| 9150 | DUF550 domain-containing protein | |||
| 14370 | drug/metabolite exporter YedA | |||
| 14375 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen4DcmP |
| 14380 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen4DcmP |
| 14385 | phosphohydrolase | |||
| 19350 | YebC/PmpR family DNA-binding transcriptional | |||
| 19355 | R | Senst12ORF9665P (100% identity) | Sen4ORF19355P | |
| 19360 | 64 aa hypothetical protein | |||
| 20440 | 3-5 exonuclease | |||
| 20445 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen4ORF20445P |
| 20450 | replication endonuclease | |||
| 22265 | TraR/DksA family transcriptional regulator | |||
| 22270 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen4ORF22270P |
| 22275 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6145 | MFS transporter | |||
| 6150 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen4ORF6150P |
| 6155 | R | StyTORF2507P (99% identity) | CAGAG | Sen4ORF6150P |
| 6160 | small effector SsaA | |||
| 14450 | SpnT protein | |||
| 14455 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Sen4ORF14455P |
| 14460 | R | StyTORF872P (100% identity) | CAAACC | Sen4ORF14455P |
| 14465 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19210 | BrnT family toxin | |||
| 19215 | R | StyTMrrP (100% identity) | Sen4MrrP | |
| 19220 | type I restriction-modification system | |||