Pectobacteriaceae bacterium C111 |
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Putative Pectobacteriaceae bacterium C111 RM systems
Ref: Brochier-Armanet,C. et al. unpublished
REBASE ref # 37175
Complete sequence: 4,918,635 bp
GenBank #: CP128859
REBASE acronym: Pba111
Org_num: 69230
All begin PCO84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5690 | site-specific integrase | |||
| 5695 | S | S2.Pba1ORF5710P (100% identity) | S2.Pba111ORF5720P | |
| 5700 | R | Pba1ORF5710P (100% identity) | Pba111ORF5720P | |
| 5705 | macro domain-containing protein | |||
| 5710 | DUF4433 domain-containing protein | |||
| 5715 | S | S1.Pba1ORF5710P (100% identity) | S1.Pba111ORF5720P | |
| 5720 | M | M.Pba1ORF5710P (100% identity) | M.Pba111ORF5720P | |
| 5725 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1875 | SPOR domain-containing protein | |||
| 1880 | M | M.Ssp39006DamP (100% identity) | M.Pba111DamP | |
| 1885 | ribulose-phosphate 3-epimerase | |||
| 3085 | DinI family protein | |||
| 3090 | M | M.Pba1ORF3080P (100% identity) | M.Pba111ORF3090P | |
| 3095 | R | Pba1ORF3080P (100% identity) | Pba111ORF3090P | |
| 3100 | DUF262 domain-containing protein | |||
| 17220 | Dam family site-specific | |||
| 17225 | M | M.Pba1ORF17245P (100% identity) | M.Pba111ORF17225P | |
| 17230 | replication endonuclease | |||
| 17245 | Tum protein | |||
| 17250 | M | M.Pba1ORF17270P (100% identity) | M.Pba111ORF17250P | |
| 17255 | R | Pba1ORF17270P (100% identity) | Pba111ORF17250P | |
| 17260 | DUF262 domain-containing protein | |||
| 21075 | DNA-binding transcriptional regulator | |||
| 21080 | M | M.Pba1ORF21105P (100% identity) | M.Pba111ORF21080P | |
| 21085 | 317 aa hypothetical protein | |||
| 21090 | DUF3696 domain-containing protein | |||
| 21095 | R | EtaSC002ORF11220P (87% identity) | Pba111ORF21080P | |
| 21100 | addiction module antidote protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3675 | IS3 family transposase | |||
| 3680 | R | Pba1MrrP (100% identity) | Pba111MrrP | |
| 3685 | HD domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3060 | DUF3850 domain-containing protein | |||
| 3065 | M | M.Pba1ORF3055P (100% identity) | M.Pba111ORF3065P | |
| 3070 | replication endonuclease | |||
| 17215 | 3-5 exonuclease | |||
| 17220 | M | M.Pba1ORF17240P (100% identity) | M.Pba111ORF17220P | |
| 17225 | DNA cytosine methyltransferase | |||