Pectobacteriaceae bacterium LS101 |
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Putative Pectobacteriaceae bacterium LS101 RM systems
Ref: Brochier-Armanet,C. et al. unpublished
REBASE ref # 37175
Complete sequence: 4,918,023 bp
GenBank #: CP128857
REBASE acronym: Pba1
Org_num: 69235
All begin PCO85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5680 | site-specific integrase | |||
| 5685 | S | S2.Pba111ORF5720P (100% identity) | S2.Pba1ORF5710P | |
| 5690 | R | Pba111ORF5720P (100% identity) | Pba1ORF5710P | |
| 5695 | macro domain-containing protein | |||
| 5700 | DUF4433 domain-containing protein | |||
| 5705 | S | S1.Pba111ORF5720P (100% identity) | S1.Pba1ORF5710P | |
| 5710 | M | M.Pba111ORF5720P (100% identity) | M.Pba1ORF5710P | |
| 5715 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1870 | SPOR domain-containing protein | |||
| 1875 | M | M.Ssp39006DamP (100% identity) | M.Pba1DamP | |
| 1880 | ribulose-phosphate 3-epimerase | |||
| 3075 | DinI family protein | |||
| 3080 | M | M.Pba111ORF3090P (100% identity) | M.Pba1ORF3080P | |
| 3085 | R | Pba111ORF3090P (100% identity) | Pba1ORF3080P | |
| 3090 | DUF262 domain-containing protein | |||
| 17240 | Dam family site-specific | |||
| 17245 | M | M.Pba111ORF17225P (100% identity) | M.Pba1ORF17245P | |
| 17250 | replication endonuclease | |||
| 17265 | Tum protein | |||
| 17270 | M | M.Pba111ORF17250P (100% identity) | M.Pba1ORF17270P | |
| 17275 | R | Pba111ORF17250P (100% identity) | Pba1ORF17270P | |
| 17280 | DUF262 domain-containing protein | |||
| 21100 | DNA-binding transcriptional regulator | |||
| 21105 | M | M.Pba111ORF21080P (100% identity) | M.Pba1ORF21105P | |
| 21110 | 317 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3665 | IS3 family transposase | |||
| 3670 | R | Pba111MrrP (100% identity) | Pba1MrrP | |
| 3675 | HD domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3050 | DUF3850 domain-containing protein | |||
| 3055 | M | M.Pba111ORF3065P (100% identity) | M.Pba1ORF3055P | |
| 3060 | replication endonuclease | |||
| 17235 | 3-5 exonuclease | |||
| 17240 | M | M.Pba111ORF17220P (100% identity) | M.Pba1ORF17240P | |
| 17245 | DNA cytosine methyltransferase | |||