Pseudomonas chlororaphis PcR3-3(2) |
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Putative Pseudomonas chlororaphis PcR3-3(2) RM systems
Ref: Zhang,Y. unpublished
REBASE ref # 23609
Complete sequence: 7,382,157 bp
GenBank #: CP128834
REBASE acronym: Pch332
Org_num: 69282
All begin PSR66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13580 | AAA family ATPase | |||
| 13585 | S | S.PspJ380I (99% identity) | CAANNNNNNNNCTGG | S.Pch332ORF13590P |
| 13590 | M | M.PspJ380I (99% identity) | CAANNNNNNNNCTGG | M.Pch332ORF13590P |
| 13595 | class I SAM-dependent DNA methyltransferase | |||
| 13590 | N-6 DNA methylase | |||
| 13595 | M | M.PspT8ORF6810P (96% identity) | M.Pch332ORF13595P | |
| 13600 | S | S.PchGP72ORFAP (98% identity) | S1.Pch332ORF13595P | |
| 13605 | 3-5 exonuclease | |||
| 13610 | R | PspT8ORF6810P (99% identity) | Pch332ORF13595P | |
| 13615 | restriction endonuclease | |||
| 13620 | RNA polymerase sigma factor SigJ | |||
| 13625 | carboxymuconolactone decarboxylase family | |||
| 13630 | S | S2.Pspt23ORF9385P (94% identity) | S2.Pch332ORF13595P | |
| 13635 | 136 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6415 | HigA family addiction module antitoxin | |||
| 6420 | M | M.PchPS5ORF24185P (86% identity) | M.Pch332ORF6420P | |
| 6425 | DNA topoisomerase III | |||
| 7480 | 72 aa hypothetical protein | |||
| 7485 | M | M.Ppa1880ORF10500P (73% identity) | M.Pch332ORF7485P | |
| 7490 | 198 aa hypothetical protein | |||
| 7505 | 76 aa hypothetical protein | |||
| 7510 | M | M.Pch60038ORF18695P (97% identity) | M.Pch332ORF7510P | |
| 7515 | reverse transcriptase | |||
| 21745 | sensor histidine kinase | |||
| 21750 | M | M.Psp21036ORF23630P (88% identity) | M.Pch332ORF21750P | |
| 21755 | 117 aa hypothetical protein | |||
| 21760 | transposase | |||
| 21765 | restriction endonuclease | |||
| 21770 | V | V.PniHBP1ORF24355P (73% identity) | V.Pch332ORF21750P | |
| 21775 | DUF2971 domain-containing protein | |||
| 21750 | DNA cytosine methyltransferase | |||
| 21755 | R | Psp12I6ORFBP (23% identity) | Pch332ORF21755AP | |
| 21760 | transposase | |||
| 21765 | R | PaeLo249ORF11630P (50% identity) | Pch332ORF21755BP | |
| 21770 | DNA mismatch endonuclease Vsr | |||