Escherichia coli TUM9868 |
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Putative Escherichia coli TUM9868 RM systems
Ref: Ikegaya,K. et al. unpublished
REBASE ref # 34910
| Sequence length: | GenBank #: | |
| Chromosome: | 4,766,183 bp | CP128923 |
| plasmid pMTY9868_IncHI2: | 235,972 bp | CP128924 |
| plasmid pMTY9868_IncN: | 48,260 bp | CP128925 |
REBASE acronym: Eco9868
Org_num: 69005
All begin QVM99_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | cell division protein DamX | |||
| 1655 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9868DamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.EcoM9868ORF4450P (100% identity) | ATGCAT | M.Eco9868ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 8865 | phosphohydrolase | |||
| 8870 | M | M.EcoM9868DcmP (100% identity) | CCWGG | M.Eco9868DcmP |
| 8875 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco9868DcmP |
| 8880 | drug/metabolite exporter YedA | |||
| 19990 | HNH endonuclease | |||
| 19995 | R | SflFF17ORF19275P (100% identity) | Eco9868ORF19995P | |
| 20000 | McrC family protein | |||
| plasmid pMTY9868_IncHI2 | ||||
| 23880 | 55 aa hypothetical protein | |||
| 23885 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco9868ORF23885P |
| 23890 | thermonuclease family protein | |||
| 24320 | 48 aa hypothetical protein | |||
| 24325 | M | M.YpsF1ORFBP (100% identity) | M.Eco9868ORF24325P | |
| 24330 | 202 aa hypothetical protein | |||
| 24440 | DNA-binding protein | |||
| 24445 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Eco9868ORF24445P |
| 24450 | 284 aa hypothetical protein | |||
| plasmid pMTY9868_IncN | ||||
| 24515 | EAL domain-containing protein | |||
| 24520 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco9868ORF24525P |
| 24525 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Eco9868ORF24525P |
| 24530 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17695 | 97 aa hypothetical protein | |||
| 17700 | R | Ecos164ORF17750P (100% identity) | ACCACC | Eco9868ORF17705P |
| 17705 | M | M.Ecos164ORF17750P (100% identity) | ACCACC | M.Eco9868ORF17705P |
| 17710 | S8 family peptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13315 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13320 | R | EcoSC487ORFBP (100% identity) | YCGR | Eco9868ORF13320P |
| 13325 | site-specific DNA recombinase | |||
| 19995 | HNH endonuclease | |||
| 20000 | R | EcoYPE3McrCP (100% identity) | Eco9868McrCP | |
| 20005 | R | EcoYPE3McrBP (100% identity) | Eco9868McrBP | |
| 20010 | DUF4942 domain-containing protein | |||