Chlorohelix allophototropha L227-S17 |
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Putative Chlorohelix allophototropha L227-S17 RM systems
Ref: Tsuji,J.M. et al. unpublished
REBASE ref # 37090
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,961,161 bp | CP128399 |
| chromosome 2: | 2,453,413 bp | CP128400 |
| plasmid unnamed1: | 375,274 bp | CP128401 |
| plasmid unnamed2: | 241,389 bp | CP128402 |
| plasmid unnamed3: | 54,957 bp | CP128403 |
REBASE acronym: Cba17
Org_num: 68866
All begin OZ401_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1190 | 289 aa hypothetical protein | |||
| 1191 | S | S.DprORF2451P (26% identity) | S.Cba17ORF1192P | |
| 1192 | M | M.AspWA102ORF1770P (59% identity) | M.Cba17ORF1192P | |
| 1193 | hemolysin family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 259 | PspA/IM30 family protein | |||
| 260 | M | M.CspsBORF3935P (38% identity) | M.Cba17ORF260P | |
| 261 | ATP-dependent zinc metalloprotease FtsH | |||
| 426 | 81 aa hypothetical protein | |||
| 427 | M | M.PspAAP82ORFEP (52% identity) | M.Cba17ORF427P | |
| 428 | CapA family protein | |||
| 1038 | 268 aa hypothetical protein | |||
| 1039 | M | M.Lsp6406V (59% identity) | M.Cba17ORF1039P | |
| 1040 | Hsp20/alpha crystallin family protein | |||
| 1260 | GrpB family protein | |||
| 1261 | M | M.Npi21ORF20800P (31% identity) | M.Cba17ORF1261P | |
| 1262 | R | AthUNI1ORF30P (50% identity) | Cba17ORF1261P | |
| 1263 | 283 aa hypothetical protein | |||
| 1655 | RAD52 family DNA repair protein | |||
| 1656 | RM | Fpl60112ORF8785P (54% identity) | Cba17ORF1656P | |
| 1657 | 160 aa hypothetical protein | |||
| 1910 | 141 aa hypothetical protein | |||
| 1911 | R | Cba17ORF4870P (44% identity) | Cba17ORF1911P | |
| 1913 | 30S ribosomal protein S20 | |||
| chromosome 2 | ||||
| 3282 | ribokinase | |||
| 3283 | RM | Txo3042ORF10690P (30% identity) | Cba17ORF3283P | |
| 3284 | NADPH:quinone oxidoreductase family protein | |||
| 4573 | DUF4180 domain-containing protein | |||
| 4574 | M | M.PbaPan110ORF51860P (61% identity) | M.Cba17ORF4574P | |
| 4575 | dNTP triphosphohydrolase | |||
| 4601 | amino acid ABC transporter substrate-binding | |||
| 4602 | M | M.CspYORF2030P (53% identity) | M.Cba17ORF4602P | |
| 4603 | caspase family protein | |||
| plasmid unnamed1 | ||||
| 4787 | four helix bundle protein | |||
| 4788 | RM | NspN6ORF2339P (48% identity) | Cba17ORF4788P | |
| 4789 | EVE domain-containing protein | |||
| 4869 | AAA family ATPase | |||
| 4870 | R | Rsp52909ORF1945P (44% identity) | Cba17ORF4870P | |
| 4871 | DNA sulfur modification protein DndB | |||
| 4870 | HNH endonuclease | |||
| 4871 | M | M.HspTD01DndBP (37% identity) | M.Cba17DndBP | |
| 4872 | DndE family protein | |||
| 4872 | DndE family protein | |||
| 4873 | M | M.DfeIS5DndDP (29% identity) | M.Cba17DndDP | |
| 4874 | DNA phosphorothioation system sulfurtransferase | |||
| 4873 | DNA sulfur modification protein DndD | |||
| 4874 | M | M.PbaEC9DndCP (52% identity) | M.Cba17DndCP | |
| 4875 | DNA sulfur modification protein DndB | |||
| 4874 | DNA phosphorothioation system sulfurtransferase | |||
| 4875 | M | M.PbaEC9DndBP (52% identity) | M.Cba17DndB2P | |
| 4876 | tyrosine-type recombinase/integrase | |||
| plasmid unnamed2 | ||||
| 4917 | 594 aa hypothetical protein | |||
| 4918 | M | M.MpsM2ORF4980P (30% identity) | M.Cba17ORF4918P | |
| 4919 | IS66 family transposase | |||
| 4938 | four helix bundle protein | |||
| 4939 | M | M.TspCOM3ORF27160P (49% identity) | M.Cba17ORF4939P | |
| 4940 | transposase | |||
| 4979 | transposase | |||
| 4980 | R | Ste3126SspHP (45% identity) | Cba17SspHP | |
| 4981 | R | Asp2016SspGP (39% identity) | Cba17SspGP | |
| ??? | R | Ste3126SspFP (35% identity) | Cba17SspFP | |
| 4983 | R | Ste3126SspDP (66% identity) | Cba17SspDP | |
| 4984 | 714 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed3 | ||||
| 5122 | 660 aa hypothetical protein | |||
| 5123 | R | AquORF38P (61% identity) | Cba17ORF5076P | |
| 5075 | DUF4209 domain-containing protein | |||
| 5076 | M | M.PcaTDA1ORF23090P (46% identity) | M.Cba17ORF5076P | |
| 5077 | 314 aa hypothetical protein | |||