Escherichia coli WL297 |
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Putative Escherichia coli WL297 RM systems
Ref: Jiang,T. unpublished
REBASE ref # 30934
| Sequence length: | GenBank #: | |
| Chromosome: | 4,736,822 bp | CP128613 |
| plasmid pWL297-2: | 96,416 bp | CP128615 |
| plasmid pWL297-blaNDM-6: | 248,334 bp | CP128614 |
REBASE acronym: Eco297
Org_num: 69014
All begin QU520_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19260 | adenine/cytosine-specific restriction | |||
| 19265 | R | EcoC492ORFBP (98% identity) | Eco297ORF19270P | |
| 19270 | M | M.EcoC492ORFBP (100% identity) | M.Eco297ORF19270P | |
| 19275 | S | S.Eco4282ORFEP (100% identity) | S.Eco297ORF19270P | |
| 19280 | endoribonuclease SymE | |||
| 19535 | JAB domain-containing protein | |||
| 19540 | M | M.Eco4282ORFDP (13% identity) | M.Eco297ORF19540P | |
| 19545 | S | S.Eco4282ORFDP (100% identity) | S.Eco297ORF19540P | |
| 19550 | 181 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.EcoC492DamP (100% identity) | GATC | M.Eco297DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco297ORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 5685 | TraR/DksA family transcriptional regulator | |||
| 5690 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco297ORF5690P |
| 5695 | replication endonuclease | |||
| 9135 | phosphohydrolase | |||
| 9140 | M | M.EcoC492DcmP (100% identity) | CCWGG | M.Eco297DcmP |
| 9145 | V | V.EcoC492DcmP (100% identity) | V.Eco297DcmP | |
| 9150 | drug/metabolite exporter YedA | |||
| plasmid pWL297-2 | ||||
| 24160 | BREX-1 system phosphatase PglZ type A | |||
| 24165 | RM | Eco8568ORF22845P (100% identity) | Eco297ORF24165P | |
| 24170 | DUF262 domain-containing protein | |||
| plasmid pWL297-blaNDM-6 | ||||
| 23090 | 55 aa hypothetical protein | |||
| 23095 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco297ORF23095P |
| 23100 | thermonuclease family protein | |||
| 23800 | 48 aa hypothetical protein | |||
| 23805 | M | M.YpsF1ORFBP (100% identity) | M.Eco297ORF23805P | |
| 23810 | 202 aa hypothetical protein | |||
| 23915 | DNA-binding protein | |||
| 23920 | M | M.YpsF1ORFDP (95% identity) | M.Eco297ORF23920P | |
| 23925 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19255 | GTPase | |||
| 19260 | R | SenHNK130MrrP (100% identity) | Eco297MrrP | |
| 19265 | type I restriction-modification system | |||
| 19280 | endoribonuclease SymE | |||
| 19285 | R | Efe5McrBP (98% identity) | Eco297McrBP | |
| 19290 | R | Efe38C01McrCP (100% identity) | Eco297McrCP | |
| 19295 | 118 aa hypothetical protein | |||