Escherichia coli HZ13 |
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Putative Escherichia coli HZ13 RM systems
Ref: Jiang,T. unpublished
REBASE ref # 30934
| Sequence length: | GenBank #: | |
| Chromosome: | 4,787,668 bp | CP128609 |
| plasmid pHZ13-2: | 101,686 bp | CP128611 |
| plasmid pHZ13-NDM: | 260,021 bp | CP128610 |
REBASE acronym: EcoHZ13
Org_num: 68955
All begin QU238_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17905 | IS5-like element ISKpn26 family transposase | |||
| ??? | S | S2.EcoLR31ORF15520P (67% identity) | S2.EcoHZ13ORF17930P | |
| 17915 | R | Sso8ORF18020P (100% identity) | EcoHZ13ORF17930P | |
| 17920 | DUF4268 domain-containing protein | |||
| 17925 | S | S.EcoS082ORF7190P (100% identity) | S1.EcoHZ13ORF17930P | |
| 17930 | M | M.EcoS082ORF7190P (100% identity) | M.EcoHZ13ORF17930P | |
| 17935 | type I Zorya anti-phage system protein ZorA1 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1640 | cell division protein DamX | |||
| 1645 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoHZ13DamP |
| 1650 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoHZ13ORF2270P |
| 2275 | site-specific integrase | |||
| 3925 | BREX-1 system phosphatase PglZ type A | |||
| 3930 | RM | EcoLECORF20010P (100% identity) | EcoHZ13ORF3930P | |
| 3935 | BREX system P-loop protein BrxC | |||
| 14805 | replication endonuclease | |||
| 14810 | M | M.EclM23NORF340P (96% identity) | M.EcoHZ13ORF14810P | |
| 14815 | TraR/DksA family transcriptional regulator | |||
| 18150 | phage holin, lambda family | |||
| 18155 | M | M.Eco886RtORF17150P (100% identity) | M.EcoHZ13ORF18155P | |
| 18160 | 95 aa hypothetical protein | |||
| 18195 | LexA family transcriptional regulator | |||
| 18200 | M | M.SflFF80ORF18305P (100% identity) | GATC | M.EcoHZ13ORF18200P |
| 18205 | PerC family transcriptional regulator | |||
| 18470 | NinE family protein | |||
| 18475 | M | M.EcoXH992ORF25315P (100% identity) | GATC | M.EcoHZ13ORF18475P |
| 18480 | recombination protein NinB | |||
| 20515 | HNH endonuclease | |||
| 20520 | R | EcosB2CORFAP (100% identity) | EcoHZ13ORF20520P | |
| 20525 | 198 aa hypothetical protein | |||
| plasmid pHZ13-2 | ||||
| 25135 | IS1-like element IS1B family transposase | |||
| 25140 | R | SflFF67ORF22305P (99% identity) | GCWGC | EcoHZ13ORF25140P |
| 25145 | XRE family transcriptional regulator | |||
| plasmid pHZ13-NDM | ||||
| 23510 | 55 aa hypothetical protein | |||
| 23515 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoHZ13ORF23515P |
| 23520 | thermonuclease family protein | |||
| 24055 | 48 aa hypothetical protein | |||
| 24060 | M | M.YpsF1ORFBP (100% identity) | M.EcoHZ13ORF24060P | |
| 24065 | 202 aa hypothetical protein | |||
| 24170 | DNA-binding protein | |||
| 24175 | M | M.YpsF1ORFDP (95% identity) | M.EcoHZ13ORF24175P | |
| 24180 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9015 | shufflon system plasmid conjugative transfer | |||
| 9020 | R | Kin1151ORF8565P (99% identity) | EcoHZ13ORF9025P | |
| 9025 | M | M.KorFY07ORF9260P (96% identity) | M.EcoHZ13ORF9025P | |
| 9030 | SpnT protein | |||