Escherichia coli strain_32 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli strain_32 RM systems
Ref: El Aila,N.A. et al. unpublished
REBASE ref # 37121
Complete sequence: 4,776,229 bp
GenBank #: CP128440
REBASE acronym: Ecos32
Org_num: 69019
All begin QT514_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6055 | ribulose-phosphate 3-epimerase | |||
| 6060 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecos32DamP |
| 6065 | cell division protein DamX | |||
| 10600 | DUF2556 family protein | |||
| 10605 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Ecos32ORF10605P |
| 10610 | DNA-binding transcriptional regulator Fis | |||
| 11415 | recombination protein NinB | |||
| 11420 | M | M.EcoMS851ORF16910P (99% identity) | GATC | M.Ecos32ORF11420P |
| 11425 | NinE family protein | |||
| 14835 | HD domain-containing protein | |||
| 14840 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Ecos32DcmP |
| 14845 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Ecos32DcmP |
| 14850 | drug/metabolite exporter YedA | |||
| 15455 | TA system toxin CbtA family protein | |||
| 15460 | M | M.EcoVEV10FORF35820P (100% identity) | GCCGGC | M.Ecos32ORF15460P |
| 15465 | R | EcoVEV10FORF35820P (100% identity) | GCCGGC | Ecos32ORF15460P |
| 15475 | glutamate-5-semialdehyde dehydrogenase | |||
| 15885 | PerC family transcriptional regulator | |||
| 15890 | M | M.EcoP231ORF14285P (100% identity) | GATC | M.Ecos32ORF15890P |
| 15895 | LexA family transcriptional regulator | |||
| 17225 | 100 aa hypothetical protein | |||
| 17230 | R | Sso8ORF19860P (100% identity) | Ecos32ORF17230P | |
| 17235 | HNH endonuclease | |||
| 20470 | replication endonuclease | |||
| 20475 | M | M.KpnSWHE4ORF17205P (49% identity) | M.Ecos32ORF20475P | |
| 20480 | TraR/DksA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17210 | SNF2-related protein | |||
| 17215 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.Ecos32ORF17215P |
| 17220 | R | SflN116ORF19490P (100% identity) | GAACC | Ecos32ORF17215P |
| 17225 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19970 | site-specific DNA recombinase | |||
| 19975 | R | SsoSE61ORF22640P (99% identity) | YCGR | Ecos32ORF19975P |
| 19980 | isocitrate/isopropylmalate family dehydrogenase | |||