Paralcaligenes species CC-YST667 |
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Putative Paralcaligenes species CC-YST667 RM systems
Ref: Lin,S.-Y. and Young,C.-C. unpublished
REBASE ref # 37027
Complete sequence: 3,284,569 bp
GenBank #: CP128233
REBASE acronym: Psp7
Org_num: 69229
All begin N7E01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 300 | 106 aa hypothetical protein | |||
| ??? | R | Bps5569ORF2776P (79% identity) | Psp7ORF320P | |
| ??? | S | S.CaqCJGORF1885P (24% identity) | S2.Psp7ORF320P | |
| 315 | S | S.CaqCJGORF1885P (28% identity) | S1.Psp7ORF320P | |
| 320 | M | M.Sni3406ORF19975P (43% identity) | M.Psp7ORF320P | |
| 325 | 145 aa hypothetical protein | |||
| 1970 | IS3 family transposase | |||
| 1975 | R | Gin17901ORFBP (95% identity) | Psp7ORF1985P | |
| 1980 | S | S.TspMZORF4P (58% identity) | S.Psp7ORF1985P | |
| ??? | M | M.Gin17901ORFBP (90% identity) | M.Psp7ORF1985P | |
| 1995 | phage integrase SAM-like domain-containing | |||
| 4060 | ATP-binding protein | |||
| 4065 | M | M.Bav119ORF1850P (89% identity) | M.Psp7ORF4065P | |
| 4070 | IS3 family transposase | |||
| 4075 | IS5 family transposase | |||
| 4080 | S | S.Asp19m6ORF1984P (19% identity) | S1.Psp7ORF4065P | |
| 4085 | S | S.Tve301ORF6060P (19% identity) | S2.Psp7ORF4065P | |
| 4090 | R | Bav119ORF1850P (44% identity) | Psp7ORF4065AP | |
| 4095 | R | AfaJQ135ORF2155P (40% identity) | Psp7ORF4065BP | |
| 4100 | 44 aa hypothetical protein | |||
| 4105 | DNA binding domain-containing protein | |||
| 4110 | ATP-binding protein | |||
| 4115 | S | S2.Ple082ORFFP (55% identity) | S3.Psp7ORF4065P | |
| 4120 | 126 aa hypothetical protein | |||
| 15370 | helix-turn-helix transcriptional regulator | |||
| 15375 | R | AfaP156ORF2364P (90% identity) | Psp7ORF15390P | |
| 15380 | S | S.Bhu16318ORFAP (14% identity) | S.Psp7ORF15390P | |
| 15385 | 57 aa hypothetical protein | |||
| 15390 | M | M.AfaP156ORF2364P (60% identity) | M.Psp7ORF15390P | |
| 15395 | TnsA endonuclease N-terminal domain-containing | |||
| 16100 | ankyrin repeat domain-containing protein | |||
| 16105 | M | M.AfaMUB14ORF13105P (91% identity) | M.Psp7ORF16105P | |
| 16110 | S | S2.Aca2508ORF6015P (74% identity) | S1.Psp7ORF16105P | |
| 16115 | S | S.KgyCG1ORF10115P (40% identity) | S2.Psp7ORF16105P | |
| 16120 | S | S.AspI09ORF12200P (22% identity) | S3.Psp7ORF16105P | |
| 16125 | DNA binding domain-containing protein | |||
| 16130 | R | PflBS2ORFCP (86% identity) | Psp7ORF16105P | |
| 16135 | winged helix-turn-helix domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2220 | DUF1376 domain-containing protein | |||
| 2225 | M | M.Psp7ORF15910P (98% identity) | M.Psp7ORF2225P | |
| 2230 | 69 aa hypothetical protein | |||
| 2335 | 128 aa hypothetical protein | |||
| 2340 | M | M.RsoF501ORFAP (54% identity) | M.Psp7ORF2340P | |
| 2345 | 101 aa hypothetical protein | |||
| 15905 | 69 aa hypothetical protein | |||
| 15910 | M | M.Psp7ORF2225P (98% identity) | M.Psp7ORF15910P | |
| 15915 | DUF1376 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5170 | transcriptional regulator | |||
| 5175 | R | Pspye3ORF11610P (7% identity) | R1.Psp7ORF5185P | |
| 5180 | R | Pspye3ORF11610P (90% identity) | R2.Psp7ORF5185P | |
| ??? | M | M.Pspye3ORF11610P (99% identity) | M.Psp7ORF5185P | |
| 5195 | recombinase family protein | |||