Campylobacter coli BCH-10328 |
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Putative Campylobacter coli BCH-10328 RM systems
Ref: Morita,D. et al. unpublished
REBASE ref # 37013
Complete sequence: 1,728,279 bp
GenBank #: AP028341
REBASE acronym: Cco10328
Org_num: 68357
All begin B10328_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15420 | alcohol dehydrogenase catalytic | |||
| 15430 | R | Cco1465ORF8545P (99% identity) | CRAANNNNNNNRTTG | Cco10328ORF15490P |
| 15440 | RNA-directed DNA polymerase | |||
| 15450 | 199 aa hypothetical protein | |||
| 15460 | 258 aa hypothetical protein | |||
| 15470 | S | S.Cco9557II (99% identity) | CRAANNNNNNNRTTG | S.Cco10328ORF15490P |
| 15480 | virulence RhuM family protein | |||
| 15490 | M | M.Cco4661ORF8340P (97% identity) | CRAANNNNNNNRTTG | M.Cco10328ORF15490P |
| 15500 | N-methyl-L-tryptophan oxidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 300 | PD-(D/E)XK nuclease family protein | |||
| 310 | RM | Csp93259ORF175P (97% identity) | Cco10328ORF310P | |
| 320 | pentapeptide repeat-containing protein | |||
| 10150 | sulfur carrier protein ThiS | |||
| 10160 | RM | Cje2058ORF558P (99% identity) | GGGTDA | Cco10328ORF10160P |
| 10170 | succinyl-diaminopimelate desuccinylase | |||
| 10190 | NAD-dependent deacetylase | |||
| 10200 | RM | Cco32ORF3715P (99% identity) | GAGNNNNNGT | Cco10328ORF10200P |
| 10210 | endonuclease MutS2 | |||
| 15900 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 15910 | M | M.Cco7923ORF8380P (100% identity) | GAATTC | M.Cco10328ORF15910P |
| 15920 | translation initiation factor IF-3 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16690 | metal ABC transporter permease | |||
| 16700 | R | Cco280McrCP (100% identity) | Cco10328McrCP | |
| 16710 | R | Cco6067McrBP (99% identity) | Cco10328McrBP | |
| 16720 | ribosome maturation factor RimP | |||