Salmonella enterica subsp. enterica serovar Gallinarum SG9R_2020 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Gallinarum SG9R_2020 RM systems
Ref: Beylefeld,A. and Abolnik,C. unpublished
REBASE ref # 37041
Complete sequence: 4,658,139 bp
GenBank #: CP118114
REBASE acronym: SenR2020
Org_num: 68496
All begin PUW39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22210 | type I restriction endonuclease | |||
| 22215 | S | S.Sens24144ORF16175P (100% identity) | GGYANNNNNNTCG | S.SenR2020ORF22220P |
| 22220 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenR2020ORF22220P |
| 22225 | restriction endonuclease | |||
| 22230 | 44 aa hypothetical protein | |||
| ??? | M | M.SenR2021ORF22255P (100% identity) | M.SenR2020ORF22235P | |
| 22240 | S | S.SenSG1ORF8600P (100% identity) | S.SenR2020ORF22235P | |
| 22245 | 3-5 exonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5400 | phosphohydrolase | |||
| 5405 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenR2020DcmP |
| 5410 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenR2020DcmP |
| 5415 | drug/metabolite exporter YedA | |||
| 16670 | DNA-binding transcriptional regulator Fis | |||
| 16675 | M | M.Ssp1806ORF2265P (100% identity) | ATGCAT | M.SenR2020ORF16675P |
| 16680 | DUF2556 family protein | |||
| 20195 | cell division protein DamX | |||
| 20200 | M | M.SenR2021DamP (100% identity) | GATC | M.SenR2020DamP |
| 20205 | ribulose-phosphate 3-epimerase | |||
| 22100 | IS3 family transposase | |||
| 22105 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenR2020ORF22105P |
| 22110 | YebC/PmpR family DNA-binding transcriptional | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1865 | MFS transporter | |||
| 1870 | M | M.SenST572ORFBP (100% identity) | CAGAG | M.SenR2020ORF1870P |
| 1875 | R | SenST572ORFBP (99% identity) | CAGAG | SenR2020ORF1870P |
| 1880 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22220 | class I SAM-dependent DNA methyltransferase | |||
| 22225 | R | Ssp1806MrrP (100% identity) | SenR2020MrrP | |
| 22230 | 44 aa hypothetical protein | |||