Aliiglaciecola species LCG003 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Aliiglaciecola species LCG003 RM systems
Ref: Wang,J. unpublished
REBASE ref # 9334
Complete sequence: 4,411,932 bp
GenBank #: CP128185
REBASE acronym: AspLCG003
Org_num: 68319
All begin QR722_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4195 | sigma-54 dependent transcriptional regulator | |||
| 4200 | R | PspMBORF10180P (98% identity) | AspLCG003ORF4205P | |
| 4205 | M | M.AmaF12ORFEP (97% identity) | M.AspLCG003ORF4205P | |
| 4210 | S | S.Psp20439ORF2227P (61% identity) | S.AspLCG003ORF4205P | |
| 4215 | DUF6161 domain-containing protein | |||
| 10125 | toll/interleukin-1 receptor domain-containing | |||
| 10130 | R | Pte005ORFFP (98% identity) | AspLCG003ORF10140P | |
| 10135 | S | S.AhyA8ORFEP (49% identity) | S.AspLCG003ORF10140P | |
| 10140 | M | M.Pte005ORFFP (82% identity) | M.AspLCG003ORF10140P | |
| 10145 | 54 aa hypothetical protein | |||
| 19030 | phage integrase N-terminal domain-containing | |||
| 19035 | S | S2.ValHNV2ORF21415P (77% identity) | S2.AspLCG003ORF19050P | |
| 19040 | R | Vpl7581ORFBP (89% identity) | AspLCG003ORF19050P | |
| 19045 | S | S.VhaBBORF5613P (54% identity) | S1.AspLCG003ORF19050P | |
| 19050 | M | M.ValHNV2ORF21415P (89% identity) | M.AspLCG003ORF19050P | |
| 19055 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4215 | DUF6161 domain-containing protein | |||
| 4220 | R | Psp16099McrBP (78% identity) | AspLCG003McrBP | |
| 4225 | R | Psp16099McrCP (94% identity) | AspLCG003McrCP | |
| 4230 | AAA family ATPase | |||
| 19065 | virulence RhuM family protein | |||
| 19070 | R | AmaF12ORFCP (90% identity) | AspLCG003ORF19070P | |
| 19075 | MarR family transcriptional regulator | |||