Escherichia coli C41 |
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Putative Escherichia coli C41 RM systems
Ref: Mihailovskaya,V. et al. unpublished
REBASE ref # 36976
Complete sequence: 5,037,216 bp
GenBank #: CP127252
REBASE acronym: EcosC41
Org_num: 68206
All begin QQ971_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5200 | 428 aa hypothetical protein | |||
| 5205 | S | S.EcoW24ORF21065P (100% identity) | GCAGNNNNNTGT | S.EcosC41ORF5210P |
| 5210 | M | M.EcosA5II (100% identity) | GCAGNNNNNTGT | M.EcosC41ORF5210P |
| 5215 | 128 aa hypothetical protein | |||
| 22695 | AAA family ATPase | |||
| 22700 | S | S.EcoQ5ORF23695P (100% identity) | CTANNNNNNCTTC | S.EcosC41ORF22705P |
| 22705 | M | M.EcoS165ORF22150P (100% identity) | CTANNNNNNCTTC | M.EcosC41ORF22705P |
| 22710 | R | EcoC311ORF21890P (100% identity) | CTANNNNNNCTTC | EcosC41ORF22705P |
| 22715 | 127 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 495 | ribulose-phosphate 3-epimerase | |||
| 500 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosC41DamP |
| 505 | cell division protein DamX | |||
| 5225 | AAA family ATPase | |||
| 5230 | R | EcosA5ORF21255P (100% identity) | EcosC41ORF5230P | |
| 5235 | HNH endonuclease | |||
| 5655 | PerC family transcriptional regulator | |||
| 5660 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcosC41ORF5660P |
| 5665 | LexA family transcriptional regulator | |||
| 8935 | cell division protein ZapA | |||
| 8940 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcosC41ORF8940P |
| 8945 | DUF1317 family protein | |||
| 10400 | recombination protein NinB | |||
| 10405 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcosC41ORF10405P |
| 10410 | NinE family protein | |||
| 15180 | 95 aa hypothetical protein | |||
| 15185 | M | M.EcoPE164ORF12715P (100% identity) | M.EcosC41ORF15185P | |
| 15190 | DUF977 family protein | |||
| 17185 | drug/metabolite exporter YedA | |||
| 17190 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcosC41DcmP |
| 17195 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcosC41DcmP |
| 17200 | phosphohydrolase | |||
| 24540 | DNA-binding transcriptional regulator Fis | |||
| 24545 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcosC41ORF24545P |
| 24550 | DUF2556 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5215 | 128 aa hypothetical protein | |||
| 5220 | R | Ecows53McrCP (100% identity) | EcosC41McrCP | |
| 5225 | R | SflN101McrBP (100% identity) | EcosC41McrBP | |
| 5230 | HNH endonuclease | |||