Salmonella enterica 20MO07PC10-S1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica 20MO07PC10-S1 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 5,036,579 bp | CP123648 |
| plasmid pN20S0154: | 301,137 bp | CP123649 |
REBASE acronym: SenPC10S1
Org_num: 68236
All begin H6N00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20635 | restriction endonuclease | |||
| 20640 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenPC10S1ORF20645P |
| 20645 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenPC10S1ORF20645P |
| 20650 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenPC10S1ORF20645P |
| 20655 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2500 | DUF2556 family protein | |||
| 2505 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenPC10S1ORF2505P |
| 2510 | DNA-binding transcriptional regulator Fis | |||
| 5630 | IS6-like element IS26 family transposase | |||
| 5635 | M | M.StyCORF187P (49% identity) | M.SenPC10S1ORF5635P | |
| 5640 | thermonuclease family protein | |||
| 6220 | ead/Ea22-like family protein | |||
| 6225 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenPC10S1ORF6225P |
| 6230 | DUF551 domain-containing protein | |||
| 9575 | PerC family transcriptional regulator | |||
| 9580 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.SenPC10S1ORF9580P |
| 9585 | RusA family crossover junction | |||
| 9830 | phosphohydrolase | |||
| 9835 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenPC10S1Dcm2P |
| 9840 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenPC10S1Dcm2P |
| 9845 | drug/metabolite exporter YedA | |||
| 20795 | BREX system P-loop protein BrxC | |||
| 20800 | RM | StyUK1IV (100% identity) | GATCAG | SenPC10S1ORF20800P |
| 20805 | AAA family ATPase | |||
| 22720 | LexA family transcriptional regulator | |||
| 22725 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenPC10S1ORF22725P |
| 22730 | PerC family transcriptional regulator | |||
| 23890 | 58 aa hypothetical protein | |||
| 23895 | M | M.SenS710ORF16210P (100% identity) | TGGCCA | M.SenPC10S1ORF23895P |
| 23900 | 499 aa hypothetical protein | |||
| 23895 | DNA adenine methylase | |||
| 23900 | R | SenS710ORF16210P (100% identity) | TGGCCA | SenPC10S1ORF23900P |
| 23905 | DinI-like family protein | |||
| plasmid pN20S0154 | ||||
| 25850 | thermonuclease family protein | |||
| 25855 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.SenPC10S1DcmP |
| 25860 | 55 aa hypothetical protein | |||
| 26225 | 106 aa hypothetical protein | |||
| 26230 | M | M.Ssp15303ORFDP (100% identity) | M.SenPC10S1ORF26230P | |
| 26235 | 202 aa hypothetical protein | |||
| 26365 | DNA-binding protein | |||
| 26370 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.SenPC10S1ORF26370P |
| 26375 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17990 | small effector SsaA | |||
| 17995 | R | StyUK1IP (99% identity) | CAGAG | SenPC10S1ORF18000P |
| 18000 | M | M.StyUK1I (100% identity) | CAGAG | M.SenPC10S1ORF18000P |
| 18005 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20630 | BrnT family toxin | |||
| 20635 | R | StyUK1MrrP (100% identity) | SenPC10S1MrrP | |
| 20640 | type I restriction-modification system | |||
| 20820 | protease Lon-related BREX system protein BrxL | |||
| 20825 | R | StyLTMrrP (100% identity) | SenPC10S1Mrr2P | |
| 20830 | AAA domain-containing protein | |||