Salmonella enterica subsp. enterica serovar Johannesburg FSIS1709981 |
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Putative Salmonella enterica subsp. enterica serovar Johannesburg FSIS1709981 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
Complete sequence: 4,682,030 bp
GenBank #: CP123665
REBASE acronym: Sen9981
Org_num: 68248
All begin B0D47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11665 | DUF29 family protein | |||
| 11670 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.Sen9981ORF11670P |
| 11675 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.Sen9981ORF11670P |
| 11680 | YecA family protein | |||
| 11685 | R | Sen8038ORF12605P (100% identity) | TCAGNNNNNNTGC | Sen9981ORF11670P |
| 11690 | SprT family zinc-dependent metalloprotease | |||
| 19495 | type IV toxin-antitoxin system YeeU family | |||
| 19500 | M | M1.SenSmo02ORF2465P (100% identity) | M2.Sen9981ORF19500P | |
| 19505 | S | S1.SenSmo02ORF2465P (98% identity) | GNNTAYNNNNNRTGG | S1.Sen9981ORF19500P |
| 19510 | DUF262 domain-containing protein | |||
| 19515 | DUF262 domain-containing HNH endonuclease family | |||
| 19520 | R | SenSmo02ORF2465P (100% identity) | Sen9981ORF19500P | |
| 19525 | SprT family zinc-dependent metalloprotease | |||
| 19530 | M | M.SenSmo02ORF2495P (100% identity) | M1.Sen9981ORF19500P | |
| 19535 | S | S.SenSmo02ORF2495P (100% identity) | GNNTAYNNNNNRTGG | S2.Sen9981ORF19500P |
| 19540 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1870 | cell division protein DamX | |||
| 1875 | M | M.StyTDamP (100% identity) | GATC | M.Sen9981DamP |
| 1880 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9981ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 5695 | PerC family transcriptional regulator | |||
| 5700 | M | M.SenST203ORF14210P (100% identity) | M.Sen9981ORF5700P | |
| 5705 | RusA family crossover junction | |||
| 7130 | DUF550 domain-containing protein | |||
| 7135 | M | M.Sen8272ORF382P (100% identity) | M.Sen9981ORF7135P | |
| 7140 | 40 aa hypothetical protein | |||
| 9320 | phosphohydrolase | |||
| 9325 | M | M.SenST203DcmP (100% identity) | CCWGG | M.Sen9981DcmP |
| 9330 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen9981DcmP |
| 9335 | drug/metabolite exporter YedA | |||
| 19475 | YebC/PmpR family DNA-binding transcriptional | |||
| 19480 | R | Ssp8103ORF19015P (100% identity) | Sen9981ORF19480P | |
| 19485 | restriction endonuclease | |||
| 20935 | LexA family transcriptional regulator | |||
| 20940 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen9981ORF20940P |
| 20945 | 28 aa hypothetical protein | |||
| 21880 | ogr/Delta-like zinc finger family protein | |||
| 21885 | M | M.SenST203ORF20920P (100% identity) | M.Sen9981ORF21885P | |
| 21890 | 66 aa hypothetical protein | |||
| 21895 | replication endonuclease | |||
| 21900 | M | M.SenST203ORF20905P (100% identity) | M1.Sen9981ORF21900P | |
| 21905 | 75 aa hypothetical protein | |||
| 21910 | M | M.SenST203ORF20895P (100% identity) | GATC | M2.Sen9981ORF21900P |
| 21915 | 127 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17105 | small effector SsaA | |||
| 17110 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen9981ORF17115P |
| 17115 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen9981ORF17115P |
| 17120 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19480 | HNH endonuclease | |||
| 19485 | R | SenJMrr2P (98% identity) | Sen9981MrrP | |
| 19490 | TA system toxin CbtA family protein | |||