Salmonella enterica subsp. enterica serovar Newport FSIS12105828 |
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Putative Salmonella enterica subsp. enterica serovar Newport FSIS12105828 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
Complete sequence: 4,845,957 bp
GenBank #: CP123671
REBASE acronym: Sen5828
Org_num: 68253
All begin LNM37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20305 | 322 aa hypothetical protein | |||
| 20310 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen5828ORF20315P |
| 20315 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen5828ORF20315P |
| 20320 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen5828ORF20315P |
| 20325 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5828ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 5590 | TraR/DksA family transcriptional regulator | |||
| 5595 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen5828ORF5595P |
| 5600 | replication endonuclease | |||
| 5825 | DUF3850 domain-containing protein | |||
| 5830 | M | M.SenS315ORF12375P (100% identity) | GATC | M.Sen5828ORF5830P |
| 5835 | replication endonuclease | |||
| 9585 | phosphohydrolase | |||
| 9590 | M | M.SenLiv11DcmP (100% identity) | CCWGG | M.Sen5828DcmP |
| 9595 | V | V.SenS50DcmP (100% identity) | V.Sen5828DcmP | |
| 9600 | drug/metabolite exporter YedA | |||
| 14515 | methyltransferase | |||
| 14520 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen5828ORF14520P |
| 14525 | 82 aa hypothetical protein | |||
| 20445 | YebC/PmpR family DNA-binding transcriptional | |||
| 20450 | R | SenZYXORFBP (100% identity) | Sen5828ORF20450P | |
| 20455 | sce7725 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18120 | small effector SsaA | |||
| 18125 | R | Ssp6947IIP (100% identity) | CAGAG | Sen5828ORF18130P |
| 18130 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen5828ORF18130P |
| 18135 | MFS transporter | |||