Salmonella enterica subsp. enterica serovar Typhimurium FSIS12032448 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium FSIS12032448 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 4,861,061 bp | CP123684 |
| plasmid pFSIS12032448: | 251,058 bp | CP123685 |
REBASE acronym: Sen2448
Org_num: 68268
All begin H7539_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3250 | endoribonuclease SymE | |||
| 3255 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen2448ORF3260P |
| 3260 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen2448ORF3260P |
| 3265 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen2448ORF3260P |
| 3270 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3100 | AAA family ATPase | |||
| 3105 | RM | StyUK1IV (100% identity) | GATCAG | Sen2448ORF3105P |
| 3110 | BREX system P-loop protein BrxC | |||
| 13960 | drug/metabolite exporter YedA | |||
| 13965 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen2448DcmP |
| 13970 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen2448DcmP |
| 13975 | phosphohydrolase | |||
| 21155 | DNA-binding transcriptional regulator Fis | |||
| 21160 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2448ORF21160P |
| 21165 | DUF2556 family protein | |||
| 21645 | ribulose-phosphate 3-epimerase | |||
| 21650 | M | M.StyTDamP (100% identity) | GATC | M.Sen2448DamP |
| 21655 | cell division protein DamX | |||
| plasmid pFSIS12032448 | ||||
| 24520 | 55 aa hypothetical protein | |||
| 24525 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen2448ORF24525P |
| 24530 | thermonuclease family protein | |||
| 24875 | 48 aa hypothetical protein | |||
| 24880 | M | M.YpsF1ORFBP (100% identity) | M.Sen2448ORF24880P | |
| 24885 | 202 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5765 | MFS transporter | |||
| 5770 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen2448ORF5770P |
| 5775 | R | StyUK1IP (99% identity) | CAGAG | Sen2448ORF5770P |
| 5780 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3265 | type I restriction-modification system | |||
| 3270 | R | StyUK1MrrP (100% identity) | Sen2448Mrr2P | |
| 3275 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17810 | replication endonuclease | |||
| 17815 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.Sen2448ORF17815P |
| 17820 | 3-5 exonuclease | |||