Salmonella enterica subsp. enterica serovar Typhimurium FSIS11815075 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium FSIS11815075 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 4,809,360 bp | CP123698 |
| plasmid pFSIS11815075: | 153,035 bp | CP123699 |
REBASE acronym: Sen5075
Org_num: 68267
All begin ED048_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3255 | endoribonuclease SymE | |||
| 3260 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen5075ORF3265P |
| 3265 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen5075ORF3265P |
| 3270 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5075ORF3265P |
| 3275 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3105 | AAA family ATPase | |||
| 3110 | RM | StyUK1IV (100% identity) | GATCAG | Sen5075ORF3110P |
| 3115 | BREX system P-loop protein BrxC | |||
| 14125 | drug/metabolite exporter YedA | |||
| 14130 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen5075DcmP |
| 14135 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen5075DcmP |
| 14140 | phosphohydrolase | |||
| 20870 | DNA-binding transcriptional regulator Fis | |||
| 20875 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5075ORF20875P |
| 20880 | DUF2556 family protein | |||
| 21365 | ribulose-phosphate 3-epimerase | |||
| 21370 | M | M.StyTDamP (100% identity) | GATC | M.Sen5075DamP |
| 21375 | cell division protein DamX | |||
| plasmid pFSIS11815075 | ||||
| 23825 | 143 aa hypothetical protein | |||
| 23830 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Sen5075ORF23830P |
| 23835 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5810 | MFS transporter | |||
| 5815 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen5075ORF5815P |
| 5820 | R | StyUK1IP (99% identity) | CAGAG | Sen5075ORF5815P |
| 5825 | small effector SsaA | |||
| 17495 | inovirus Gp2 family protein | |||
| 17500 | R | SenXSKORFDP (100% identity) | CACCGT | Sen5075ORF17505P |
| 17505 | M | M.SenXSKORFDP (100% identity) | CACCGT | M.Sen5075ORF17505P |
| 17510 | GTPase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3270 | type I restriction-modification system | |||
| 3275 | R | StyUK1MrrP (100% identity) | Sen5075Mrr2P | |
| 3280 | BrnT family toxin | |||