Salmonella enterica subsp. enterica serovar Mbandaka FSIS11814474 |
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Putative Salmonella enterica subsp. enterica serovar Mbandaka FSIS11814474 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 4,714,175 bp | CP123700 |
| plasmid pFSIS11814474-1: | 163,603 bp | CP123701 |
| plasmid pFSIS11814474-2: | 92,592 bp | CP123702 |
REBASE acronym: Sen4474
Org_num: 68251
All begin D8I48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3280 | endoribonuclease SymE | |||
| 3285 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen4474ORF3290P |
| 3290 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen4474ORF3290P |
| 3295 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen4474ORF3290P |
| 3300 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3130 | 97 aa hypothetical protein | |||
| 3135 | R | SenXB08ORF19940P (100% identity) | Sen4474ORF3135P | |
| 3140 | response regulator receiver domain | |||
| 13335 | drug/metabolite exporter YedA | |||
| 13340 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen4474DcmP |
| 13345 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen4474DcmP |
| 13350 | phosphohydrolase | |||
| 17030 | 470 aa hypothetical protein | |||
| 17035 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.Sen4474ORF17035P |
| 17040 | zinc ribbon domain-containing protein | |||
| 19490 | replication endonuclease | |||
| 19495 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen4474ORF19495P |
| 19500 | DUF2732 family protein | |||
| 20410 | DNA-binding transcriptional regulator Fis | |||
| 20415 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4474ORF20415P |
| 20420 | DUF2556 family protein | |||
| 20900 | ribulose-phosphate 3-epimerase | |||
| 20905 | M | M.StyTDamP (100% identity) | GATC | M.Sen4474DamP |
| 20910 | cell division protein DamX | |||
| plasmid pFSIS11814474-1 | ||||
| 23760 | 100 aa hypothetical protein | |||
| 23765 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Sen4474ORF23765P |
| 23770 | 143 aa hypothetical protein | |||
| plasmid pFSIS11814474-2 | ||||
| 24130 | 206 aa hypothetical protein | |||
| ??? | M | M.EcoS1720ORFAP (90% identity) | M.Sen4474ORF24135P | |
| 24140 | glutamine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5585 | MFS transporter | |||
| 5590 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen4474ORF5590P |
| 5595 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen4474ORF5590P |
| 5600 | small effector SsaA | |||