Salmonella enterica subsp. enterica serovar Newport FSIS11814458 |
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Putative Salmonella enterica subsp. enterica serovar Newport FSIS11814458 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
Complete sequence: 4,880,130 bp
GenBank #: CP123686
REBASE acronym: Sen4458
Org_num: 68252
All begin D8I99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3415 | endoribonuclease SymE | |||
| 3420 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen4458ORF3425P |
| 3425 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen4458ORF3425P |
| 3430 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen4458ORF3425P |
| 3435 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7350 | 79 aa hypothetical protein | |||
| 7355 | M | M2.Sens29868ORF15995P (100% identity) | M1.Sen4458ORF7355P | |
| 7360 | DUF4406 domain-containing protein | |||
| 7365 | M | M2.Sen757ORF7355P (100% identity) | M2.Sen4458ORF7355P | |
| 7370 | replication endonuclease | |||
| 9430 | 82 aa hypothetical protein | |||
| 9435 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen4458ORF9435P |
| 9440 | methyltransferase | |||
| 14355 | drug/metabolite exporter YedA | |||
| 14360 | V | V.SenS50DcmP (100% identity) | V.Sen4458DcmP | |
| 14365 | M | M.SenLiv11DcmP (100% identity) | CCWGG | M.Sen4458DcmP |
| 14370 | phosphohydrolase | |||
| 18160 | replication endonuclease | |||
| 18165 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen4458ORF18165P |
| 18170 | TraR/DksA family transcriptional regulator | |||
| 21550 | DNA-binding transcriptional regulator Fis | |||
| 21555 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4458ORF21555P |
| 21560 | DUF2556 family protein | |||
| 22040 | ribulose-phosphate 3-epimerase | |||
| 22045 | M | M.StyTDamP (100% identity) | GATC | M.Sen4458DamP |
| 22050 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5605 | MFS transporter | |||
| 5610 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen4458ORF5610P |
| 5615 | R | Ssp6947IIP (100% identity) | CAGAG | Sen4458ORF5610P |
| 5620 | small effector SsaA | |||