Salmonella enterica subsp. enterica serovar Newport FSIS12142912 |
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Putative Salmonella enterica subsp. enterica serovar Newport FSIS12142912 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
Complete sequence: 4,815,831 bp
GenBank #: CP123669
REBASE acronym: Sen2912
Org_num: 68254
All begin LD566_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20110 | 322 aa hypothetical protein | |||
| 20115 | R | Spy5740IP (99% identity) | GACNNNNNNNRTCC | Sen2912ORF20120P |
| 20120 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen2912ORF20120P |
| 20125 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen2912ORF20120P |
| 20130 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2912ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 5590 | TraR/DksA family transcriptional regulator | |||
| 5595 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen2912ORF5595P |
| 5600 | replication endonuclease | |||
| 9390 | phosphohydrolase | |||
| 9395 | M | M.SenLiv11DcmP (100% identity) | CCWGG | M.Sen2912DcmP |
| 9400 | V | V.SenS50DcmP (100% identity) | V.Sen2912DcmP | |
| 9405 | drug/metabolite exporter YedA | |||
| 14320 | methyltransferase | |||
| 14325 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen2912ORF14325P |
| 14330 | 82 aa hypothetical protein | |||
| 20250 | YebC/PmpR family DNA-binding transcriptional | |||
| 20255 | R | SenZYXORFBP (100% identity) | Sen2912ORF20255P | |
| 20260 | sce7725 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17925 | small effector SsaA | |||
| 17930 | R | Ssp6947IIP (100% identity) | CAGAG | Sen2912ORF17935P |
| 17935 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen2912ORF17935P |
| 17940 | MFS transporter | |||