Salmonella enterica subsp. enterica serovar 4,[5],12:i:- FSIS12035116 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- FSIS12035116 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 5,016,958 bp | CP123674 |
| plasmid pFSIS12035116-1: | 244,678 bp | CP123673 |
REBASE acronym: Sen5116
Org_num: 68246
All begin IR414_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21775 | restriction endonuclease | |||
| 21780 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5116ORF21785P |
| 21785 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen5116ORF21785P |
| 21790 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen5116ORF21785P |
| 21795 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3815 | DUF2556 family protein | |||
| 3820 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5116ORF3820P |
| 3825 | DNA-binding transcriptional regulator Fis | |||
| 4735 | DUF2732 family protein | |||
| 4740 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen5116ORF4740P |
| 4745 | replication endonuclease | |||
| 7140 | IS6-like element IS26 family transposase | |||
| 7145 | M | M.StyCORF187P (49% identity) | M.Sen5116ORF7145P | |
| 7150 | thermonuclease family protein | |||
| 7730 | ead/Ea22-like family protein | |||
| 7735 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen5116ORF7735P |
| 7740 | DUF551 domain-containing protein | |||
| 11075 | PerC family transcriptional regulator | |||
| 11080 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen5116ORF11080P |
| 11085 | RusA family crossover junction | |||
| 11330 | phosphohydrolase | |||
| 11335 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen5116DcmP |
| 11340 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen5116DcmP |
| 11345 | drug/metabolite exporter YedA | |||
| 21935 | BREX system P-loop protein BrxC | |||
| 21940 | RM | StyUK1IV (100% identity) | GATCAG | Sen5116ORF21940P |
| 21945 | AAA family ATPase | |||
| 23860 | LexA family transcriptional regulator | |||
| 23865 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen5116ORF23865P |
| 23870 | PerC family transcriptional regulator | |||
| plasmid pFSIS12035116-1 | ||||
| 670 | thermonuclease family protein | |||
| 675 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen5116ORF675P |
| 680 | 55 aa hypothetical protein | |||
| 1155 | 48 aa hypothetical protein | |||
| 1160 | M | M.YpsF1ORFBP (100% identity) | M.Sen5116ORF1160P | |
| 1165 | 202 aa hypothetical protein | |||
| 1295 | DNA-binding protein | |||
| 1300 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen5116ORF1300P |
| 1305 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19470 | small effector SsaA | |||
| 19475 | R | StyUK1IP (99% identity) | CAGAG | Sen5116ORF19480P |
| 19480 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen5116ORF19480P |
| 19485 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21770 | BrnT family toxin | |||
| 21775 | R | StyUK1MrrP (100% identity) | Sen5116MrrP | |
| 21780 | type I restriction-modification system | |||
| 21960 | protease Lon-related BREX system protein BrxL | |||
| 21965 | R | StyLTMrrP (100% identity) | Sen5116Mrr2P | |
| 21970 | AAA domain-containing protein | |||