Salmonella enterica subsp. enterica serovar 4,[5],12:i:- FSIS11809860 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- FSIS11809860 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 4,991,456 bp | CP123692 |
| plasmid pFSIS11809860-1: | 175,970 bp | CP123693 |
REBASE acronym: Sen9860
Org_num: 68242
All begin DNB19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4005 | endoribonuclease SymE | |||
| 4010 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen9860ORF4020P |
| 4015 | IS4-like element ISVsa5 family transposase | |||
| 4020 | M | M.StyLTIII (97% identity) | GAGNNNNNNRTAYG | M.Sen9860ORF4020P |
| 4025 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen9860ORF4020P |
| 4030 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1930 | PerC family transcriptional regulator | |||
| 1935 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen9860ORF1935P |
| 1940 | LexA family transcriptional regulator | |||
| 3855 | AAA family ATPase | |||
| 3860 | RM | StyUK1IV (100% identity) | GATCAG | Sen9860ORF3860P |
| 3865 | BREX system P-loop protein BrxC | |||
| 14480 | drug/metabolite exporter YedA | |||
| 14485 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen9860DcmP |
| 14490 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen9860DcmP |
| 14495 | phosphohydrolase | |||
| 14740 | RusA family crossover junction | |||
| 14745 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen9860ORF14745P |
| 14750 | PerC family transcriptional regulator | |||
| 18105 | DUF551 domain-containing protein | |||
| 18110 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen9860ORF18110P |
| 18115 | ead/Ea22-like family protein | |||
| 18680 | thermonuclease family protein | |||
| 18685 | M | M.StyCORF187P (49% identity) | M.Sen9860ORF18685P | |
| 18690 | IS6-like element IS26 family transposase | |||
| 21090 | replication endonuclease | |||
| 21095 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen9860ORF21095P |
| 21100 | DUF2732 family protein | |||
| 22010 | DNA-binding transcriptional regulator Fis | |||
| 22015 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9860ORF22015P |
| 22020 | DUF2556 family protein | |||
| 22505 | ribulose-phosphate 3-epimerase | |||
| 22510 | M | M.StyTDamP (100% identity) | GATC | M.Sen9860DamP |
| 22515 | cell division protein DamX | |||
| plasmid pFSIS11809860-1 | ||||
| 25450 | 143 aa hypothetical protein | |||
| 25455 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Sen9860ORF25455P |
| 25460 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6320 | MFS transporter | |||
| 6325 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen9860ORF6325P |
| 6330 | R | StyUK1IP (99% identity) | CAGAG | Sen9860ORF6325P |
| 6335 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3830 | AAA domain-containing protein | |||
| 3835 | R | StyLTMrrP (100% identity) | Sen9860MrrP | |
| 3840 | protease Lon-related BREX system protein BrxL | |||
| 4025 | type I restriction-modification system | |||
| 4030 | R | StyUK1MrrP (100% identity) | Sen9860Mrr2P | |
| 4035 | BrnT family toxin | |||