Pseudomonas aeruginosa 3796A |
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Putative Pseudomonas aeruginosa 3796A RM systems
Ref: Ivanov,I. et al. unpublished
REBASE ref # 36964
| Sequence length: | GenBank #: | |
| chromosome 3796A: | 7,001,594 bp | OX638564 |
| plasmid p3796A: | 178,483 bp | OX638565 |
REBASE acronym: Pae3796A
Org_num: 68170
All begin PAE3796A_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 3796A | ||||
| 12410 | WYL domain-containing protein | |||
| 12415 | M | M.PaeWC55ORF6515P (100% identity) | TRGANNNNNNTGC | M.Pae3796AORF12415P |
| 12420 | S | S.PaeTJM4ORFDP (100% identity) | TRGANNNNNNTGC | S.Pae3796AORF12415P |
| 12425 | Helicase-C-3 domain-containing protein | |||
| 23925 | ATP-dependent endonuclease of the OLD | |||
| 23930 | S | S.Pfl10783I (100% identity) | CYYANNNNNNCTGC | S.Pae3796AORF23935P |
| 23935 | M | M.Pfl10783I (100% identity) | CYYANNNNNNCTGC | M.Pae3796AORF23935P |
| 23940 | DNA recombination protein RmuC | |||
| 23945 | R | PaeP23aORF23490P (100% identity) | CYYANNNNNNCTGC | Pae3796AORF23935P |
| 23950 | HTH-8 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 3796A | ||||
| 4700 | HsdR | |||
| 4705 | M | M.PaePA57ORF4740P (100% identity) | M.Pae3796AORF4705P | |
| 4710 | ATP-binding protein | |||
| 11450 | Pyridoxamine 5-phosphate oxidase | |||
| 11455 | M | M.Pmo4ORF9690P (100% identity) | M.Pae3796AORF11455P | |
| 11460 | DNA topoisomerase I, ssDNA-binding Zn-finger and | |||
| 14010 | Pyridoxamine 5-phosphate oxidase | |||
| 14015 | M | M.Ssp405ORF8290P (100% identity) | M.Pae3796AORF14015P | |
| 14020 | DNA topoisomerase I, ssDNA-binding Zn-finger and | |||
| 24630 | DUF1376 domain-containing protein | |||
| 24635 | RM | Pae1793ORF24135P (100% identity) | Pae3796AORF24635P | |
| 24640 | HTH merR-type domain-containing protein | |||
| plasmid p3796A | ||||
| 32905 | DSHCT domain-containing protein | |||
| 32910 | M | M.PaePD2aORF12020P (100% identity) | M.Pae3796AORF32910P | |
| 32915 | DUF3348 domain-containing protein | |||
| 33180 | 68 aa hypothetical protein | |||
| 33185 | M | M.PaePALA54ORF6319P (100% identity) | M.Pae3796AORF33185P | |
| 33190 | Conserved secreted protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 3796A | ||||
| 24720 | Abortive phage infection protein | |||
| 24725 | M | M.Pae238ORF12810P (100% identity) | M.Pae3796AORF24725P | |
| 24730 | R | Pae238ORF12810P (100% identity) | Pae3796AORF24725P | |
| 24735 | Wobble nucleotide-excising tRNase | |||