Salmonella enterica subsp. enterica serovar Typhi 2027-2019_CO_04_Copr1 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 2027-2019_CO_04_Copr1 RM systems
Ref: Lagos,R.M. et al. unpublished
REBASE ref # 36987
Complete sequence: 4,780,113 bp
GenBank #: CP120392
REBASE acronym: Senr1
Org_num: 68264
All begin PVA84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19300 | restriction endonuclease | |||
| 19305 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Senr1ORF19310P |
| 19310 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Senr1ORF19310P |
| 19315 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Senr1ORF19310P |
| 19320 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.StyUK1III (100% identity) | ATGCAT | M.Senr1ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 8900 | phosphohydrolase | |||
| 8905 | M | M.StyTDcmP (100% identity) | CCWGG | M.Senr1DcmP |
| 8910 | V | V.StyTDcmP (100% identity) | CCWGG | V.Senr1DcmP |
| 8915 | drug/metabolite exporter YedA | |||
| 14185 | DUF550 domain-containing protein | |||
| 14190 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Senr1ORF14190P |
| 14195 | ead/Ea22-like family protein | |||
| 14250 | DGQHR domain-containing protein | |||
| 14255 | M | M.StyTORF1926P (95% identity) | M.Senr1ORF14255P | |
| 14260 | DUF4060 family protein | |||
| 19440 | 91 aa hypothetical protein | |||
| 19445 | R | Senst12ORF9665P (100% identity) | Senr1ORF19445P | |
| 19450 | 64 aa hypothetical protein | |||
| 20525 | 3-5 exonuclease | |||
| 20530 | M | M.StyTORF4329P (100% identity) | GATC | M.Senr1ORF20530P |
| 20535 | replication endonuclease | |||
| 22195 | TraR/DksA family transcriptional regulator | |||
| 22200 | M | M.StyTORF3409P (100% identity) | GATC | M.Senr1ORF22200P |
| 22205 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8820 | shufflon system plasmid conjugative transfer | |||
| 8825 | R | StyTORF872P (100% identity) | CAAACC | Senr1ORF8830P |
| 8830 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Senr1ORF8830P |
| 8835 | SpnT protein | |||
| 17175 | small effector SsaA | |||
| 17180 | R | SenCO03ORF17110P (100% identity) | CAGAG | Senr1ORF17185P |
| 17185 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Senr1ORF17185P |
| 17190 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19295 | BrnT family toxin | |||
| 19300 | R | StyTMrrP (100% identity) | Senr1MrrP | |
| 19305 | type I restriction-modification system | |||