Salmonella enterica subsp. enterica serovar Typhi 2027-2019_CI |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 2027-2019_CI RM systems
Ref: Lagos,R.M. et al. unpublished
REBASE ref # 36987
Complete sequence: 4,780,244 bp
GenBank #: CP120394
REBASE acronym: Sen2027
Org_num: 68263
All begin PVA73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19295 | restriction endonuclease | |||
| 19300 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen2027ORF19305P |
| 19305 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen2027ORF19305P |
| 19310 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen2027ORF19305P |
| 19315 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2027ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 9090 | DUF4060 family protein | |||
| 9095 | M | M.StyTORF1926P (95% identity) | M.Sen2027ORF9095P | |
| 9100 | DGQHR domain-containing protein | |||
| 9155 | ead/Ea22-like family protein | |||
| 9160 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen2027ORF9160P |
| 9165 | DUF550 domain-containing protein | |||
| 14435 | drug/metabolite exporter YedA | |||
| 14440 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen2027DcmP |
| 14445 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen2027DcmP |
| 14450 | phosphohydrolase | |||
| 19430 | YebC/PmpR family DNA-binding transcriptional | |||
| 19435 | R | Senst12ORF9665P (100% identity) | Sen2027ORF19435P | |
| 19440 | 64 aa hypothetical protein | |||
| 20515 | 3-5 exonuclease | |||
| 20520 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen2027ORF20520P |
| 20525 | replication endonuclease | |||
| 22185 | TraR/DksA family transcriptional regulator | |||
| 22190 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen2027ORF22190P |
| 22195 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6160 | MFS transporter | |||
| 6165 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen2027ORF6165P |
| 6170 | R | Senr1ORF17185P (100% identity) | CAGAG | Sen2027ORF6165P |
| 6175 | small effector SsaA | |||
| 14515 | SpnT protein | |||
| 14520 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Sen2027ORF14520P |
| 14525 | R | StyTORF872P (100% identity) | CAAACC | Sen2027ORF14520P |
| 14530 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19290 | BrnT family toxin | |||
| 19295 | R | StyTMrrP (100% identity) | Sen2027MrrP | |
| 19300 | type I restriction-modification system | |||