Salmonella enterica subsp. enterica serovar Typhi 1698-2017_CO_06 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 1698-2017_CO_06 RM systems
Ref: Lagos,R.M. et al. unpublished
REBASE ref # 36987
Complete sequence: 4,777,800 bp
GenBank #: CP120393
REBASE acronym: SenCO06
Org_num: 68262
All begin PVA83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19230 | restriction endonuclease | |||
| 19235 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenCO06ORF19240P |
| 19240 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.SenCO06ORF19240P |
| 19245 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenCO06ORF19240P |
| 19250 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2210 | DUF2556 family protein | |||
| 2215 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenCO06ORF2215P |
| 2220 | DNA-binding transcriptional regulator Fis | |||
| 9160 | DUF4060 family protein | |||
| 9165 | M | M.StyTORF1926P (95% identity) | M.SenCO06ORF9165P | |
| 9170 | DGQHR domain-containing protein | |||
| 9225 | ead/Ea22-like family protein | |||
| 9230 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenCO06ORF9230P |
| 9235 | DUF550 domain-containing protein | |||
| 14480 | drug/metabolite exporter YedA | |||
| 14485 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenCO06DcmP |
| 14490 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenCO06DcmP |
| 14495 | phosphohydrolase | |||
| 19365 | YebC/PmpR family DNA-binding transcriptional | |||
| 19370 | R | Senst12ORF9665P (100% identity) | SenCO06ORF19370P | |
| 19375 | 64 aa hypothetical protein | |||
| 20460 | 3-5 exonuclease | |||
| 20465 | M | M.StyTORF4329P (100% identity) | GATC | M.SenCO06ORF20465P |
| 20470 | replication endonuclease | |||
| 22130 | TraR/DksA family transcriptional regulator | |||
| 22135 | M | M.StyTORF3409P (100% identity) | GATC | M.SenCO06ORF22135P |
| 22140 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6230 | MFS transporter | |||
| 6235 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenCO06ORF6235P |
| 6240 | R | StyTORF2507P (99% identity) | CAGAG | SenCO06ORF6235P |
| 6245 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19225 | BrnT family toxin | |||
| 19230 | R | StyTMrrP (100% identity) | SenCO06MrrP | |
| 19235 | type I restriction-modification system | |||